RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ZFPM1Q8IX07 1006 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 CCDC144CPQ8IYA2 1237 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 DNAJC18Q9H819 358 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 ELP1O95163 1332 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 CNTNAP5Q8WYK1 1306 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 RPS12P25398 132 aaKnown RBP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 RBM5P52756 815 aaKnown RBP eCLIP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 ZNF280AP59817 542 aaPredicted RBP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 SSRP1Q08945 709 aaKnown RBP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 GRM4Q14833 912 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 TMTC3Q6ZXV5 915 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 JDP2Q8WYK2 163 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 PHKBQ93100 1093 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 C8orf76Q96K31 380 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 TDRD3Q9H7E2 651 aaKnown RBP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 PPP1R1BQ9UD71 204 aaPredicted RBP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 CNPY2Q9Y2B0 182 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 CNTNAP1P78357 1384 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 DDTLA6NHG4 134 aaPredicted RBP6.41□□□□□ -1.38
EPHA4-202ENST00000409854 DEXIO95424 95 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 RASSF7Q02833 373 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 DNM1Q05193 864 aaKnown RBP6.41□□□□□ -1.38
EPHA4-202ENST00000409854 TNIP1Q15025 636 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 TATDN1Q6P1N9 297 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 PNMA1Q8ND90 353 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 WASF1Q92558 559 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 KAT14Q9H8E8 782 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 ZBTB12Q9Y330 459 aaPredicted RBP6.41□□□□□ -1.38
EPHA4-202ENST00000409854 PRPF3O43395 683 aaKnown RBP6.41□□□□□ -1.38
EPHA4-202ENST00000409854 PRPF40AO75400 957 aaKnown RBP6.41□□□□□ -1.38
EPHA4-202ENST00000409854 CACNB3P54284 484 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 ATL3Q6DD88 541 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 FERMT3Q86UX7 667 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 NUP133Q8WUM0 1156 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 TMEM47Q9BQJ4 181 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 ALG1Q9BT22 464 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 SLC26A6Q9BXS9 759 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 PI4KBQ9UBF8 816 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 ZNF70Q9UC06 446 aaPredicted RBP6.41□□□□□ -1.38
EPHA4-202ENST00000409854 DOCK1Q14185 1865 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 PAPPA2Q9BXP8 1791 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 PPFIA3O75145 1194 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 PLEKHA8P1O95397 391 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 AKR1B1P15121 316 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 KRT85P78386 507 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 DLGAP5Q15398 846 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 PKN1Q16512 942 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 FOXP4Q8IVH2 680 aaPredicted RBP6.41□□□□□ -1.38
EPHA4-202ENST00000409854 TRIM22Q8IYM9 498 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 OGFOD1Q8N543 542 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 CTCFLQ8NI51 663 aaPredicted RBP6.41□□□□□ -1.38
EPHA4-202ENST00000409854 GPT2Q8TD30 523 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 CEP95Q96GE4 821 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 CCDC17Q96LX7 622 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 AIFM3Q96NN9 605 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 ARID3AQ99856 593 aa6.41□□□□□ -1.38
EPHA4-202ENST00000409854 MBD3O95983 291 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 TOP1P11387 765 aaKnown RBP6.4□□□□□ -1.38
EPHA4-202ENST00000409854 KIF5BP33176 963 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 GUCY1A2P33402 732 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 KIF23Q02241 960 aaPredicted RBP6.4□□□□□ -1.38
EPHA4-202ENST00000409854 CSPP1Q1MSJ5 1256 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 BRAPQ7Z569 592 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 FAM83AQ86UY5 434 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 SRBD1Q8N5C6 995 aaKnown RBP6.4□□□□□ -1.38
EPHA4-202ENST00000409854 FAM151AQ8WW52 585 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 DPF2Q92785 391 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 MTMR4Q9NYA4 1195 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 PGAP2Q9UHJ9 254 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 MAD2L2Q9UI95 211 aa6.4□□□□□ -1.38
EPHA4-202ENST00000409854 PALM3A6NDB9 673 aaPredicted RBP6.4□□□□□ -1.39
EPHA4-202ENST00000409854 UBE2Q2LH0YL09 131 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 SNHG28P0DPA3 235 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 U2AF2P26368 475 aaKnown RBP eCLIP6.4□□□□□ -1.39
EPHA4-202ENST00000409854 TCP10Q12799 353 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 KRT40Q6A162 431 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 FHDC1Q9C0D6 1143 aaPredicted RBP6.4□□□□□ -1.39
EPHA4-202ENST00000409854 TMOD2Q9NZR1 351 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 PARP14Q460N5 1801 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 PHIPQ8WWQ0 1821 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 KIF28PB7ZC32 967 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 MMP1P03956 469 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 CDK11BP21127 795 aaKnown RBP6.4□□□□□ -1.39
EPHA4-202ENST00000409854 SMARCA1P28370 1054 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 PPP4R3BQ5MIZ7 849 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 FAM173BQ6P4H8 233 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 SHISA4Q96DD7 197 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 NAP1L5Q96NT1 182 aaPredicted RBP6.4□□□□□ -1.39
EPHA4-202ENST00000409854 SCAND2PQ9GZW5 306 aaPredicted RBP6.4□□□□□ -1.39
EPHA4-202ENST00000409854 GDPD2Q9HCC8 539 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 MYOZ2Q9NPC6 264 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 GJB4Q9NTQ9 266 aa6.4□□□□□ -1.39
EPHA4-202ENST00000409854 RBM27Q9P2N5 1060 aaKnown RBP6.4□□□□□ -1.39
EPHA4-202ENST00000409854 DDX49Q9Y6V7 483 aaKnown RBP6.4□□□□□ -1.39
EPHA4-202ENST00000409854 WNT10BO00744 389 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 GNAQP50148 359 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 FOSBP53539 338 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 UBE2HP62256 183 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 GUCY1B3Q02153 619 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms