RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 C20orf194Q5TEA3 1177 aa17.81■□□□□ 0.44
CBX3-203ENST00000409747 UBE2Q1Q7Z7E8 422 aa17.81■□□□□ 0.44
CBX3-203ENST00000409747 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
CBX3-203ENST00000409747 DCP1AQ9NPI6 582 aaPredicted RBP17.81■□□□□ 0.44
CBX3-203ENST00000409747 GJD2Q9UKL4 321 aa17.81■□□□□ 0.44
CBX3-203ENST00000409747 MYH7P12883 1935 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 HABP4Q5JVS0 413 aaKnown RBP17.8■□□□□ 0.44
CBX3-203ENST00000409747 ZSCAN25Q6NSZ9 544 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 AMOTL1Q8IY63 956 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 SDR42E1Q8WUS8 393 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 DPF3Q92784 378 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 EDC3Q96F86 508 aaKnown RBP17.8■□□□□ 0.44
CBX3-203ENST00000409747 DDRGK1Q96HY6 314 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 DEFB118Q96PH6 123 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 NUDT12Q9BQG2 462 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 TXNRD2Q9NNW7 524 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 ATP8A2Q9NTI2 1148 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 SWAP70Q9UH65 585 aa17.8■□□□□ 0.44
CBX3-203ENST00000409747 TFRCP02786 760 aaKnown RBP17.79■□□□□ 0.44
CBX3-203ENST00000409747 VCAM1P19320 739 aa17.79■□□□□ 0.44
CBX3-203ENST00000409747 TRMT44Q8IYL2 757 aaKnown RBP17.79■□□□□ 0.44
CBX3-203ENST00000409747 PAGR1Q9BTK6 254 aa17.79■□□□□ 0.44
CBX3-203ENST00000409747 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■■□□□ 14.4
CBX3-203ENST00000409747 ARMT1Q9H993 441 aa17.79■□□□□ 0.44
CBX3-203ENST00000409747 RBPJLQ9UBG7 517 aa17.79■□□□□ 0.44
CBX3-203ENST00000409747 PLXNB2O15031 1838 aa17.79■□□□□ 0.44
CBX3-203ENST00000409747 MPHOSPH10O00566 681 aaKnown RBP17.78■□□□□ 0.44
CBX3-203ENST00000409747 MBD4O95243 580 aa17.78■□□□□ 0.44
CBX3-203ENST00000409747 XRCC5P13010 732 aaKnown RBP17.78■□□□□ 0.44
CBX3-203ENST00000409747 CCNA1P78396 465 aa17.78■□□□□ 0.44
CBX3-203ENST00000409747 UBE3CQ15386 1083 aa17.78■□□□□ 0.44
CBX3-203ENST00000409747 GPATCH3Q96I76 525 aa17.78■□□□□ 0.44
CBX3-203ENST00000409747 CWC22Q9HCG8 908 aaKnown RBP17.78■□□□□ 0.44
CBX3-203ENST00000409747 RABGAP1Q9Y3P9 1069 aa17.78■□□□□ 0.44
CBX3-203ENST00000409747 MYH8P13535 1937 aa17.78■□□□□ 0.44
CBX3-203ENST00000409747 CATSPERGQ6ZRH7 1159 aa17.78■□□□□ 0.44
CBX3-203ENST00000409747 CRISPLD2Q9H0B8 497 aa17.78■□□□□ 0.44
CBX3-203ENST00000409747 HMX1Q9NP08 348 aaPredicted RBP17.78■□□□□ 0.44
CBX3-203ENST00000409747 RPTORQ8N122 1335 aa17.77■□□□□ 0.44
CBX3-203ENST00000409747 H0YGN5 161 aa17.77■□□□□ 0.44
CBX3-203ENST00000409747 GLRX3O76003 335 aaKnown RBP17.77■□□□□ 0.44
CBX3-203ENST00000409747 LBX2Q6XYB7 198 aa17.77■□□□□ 0.44
CBX3-203ENST00000409747 TMEM179Q6ZVK1 233 aa17.77■□□□□ 0.44
CBX3-203ENST00000409747 ACER1Q8TDN7 264 aa17.77■□□□□ 0.44
CBX3-203ENST00000409747 PCDH10Q9P2E7 1040 aa17.77■□□□□ 0.44
CBX3-203ENST00000409747 CYP2B6P20813 491 aa17.76■□□□□ 0.43
CBX3-203ENST00000409747 RGS2P41220 211 aa17.76■□□□□ 0.43
CBX3-203ENST00000409747 SEPT2Q15019 361 aa17.76■□□□□ 0.43
CBX3-203ENST00000409747 GPR142Q7Z601 462 aa17.76■□□□□ 0.43
CBX3-203ENST00000409747 PLEKHH3Q7Z736 793 aa17.76■□□□□ 0.43
CBX3-203ENST00000409747 ANKLE1Q8NAG6 615 aa17.76■□□□□ 0.43
CBX3-203ENST00000409747 ECHDC1Q9NTX5 307 aa17.76■□□□□ 0.43
CBX3-203ENST00000409747 NR2E3Q9Y5X4 410 aa17.76■□□□□ 0.43
CBX3-203ENST00000409747 ZKSCAN1P17029 563 aaPredicted RBP17.75■□□□□ 0.43
CBX3-203ENST00000409747 GUCY1A2P33402 732 aa17.75■□□□□ 0.43
CBX3-203ENST00000409747 Q3C1V9 767 aa17.75■□□□□ 0.43
CBX3-203ENST00000409747 TRIB2Q92519 343 aa17.75■□□□□ 0.43
CBX3-203ENST00000409747 PORCNQ9H237 461 aa17.75■□□□□ 0.43
CBX3-203ENST00000409747 RPAP3Q9H6T3 665 aaPredicted RBP17.75■□□□□ 0.43
CBX3-203ENST00000409747 SH2D4AQ9H788 454 aa17.75■□□□□ 0.43
CBX3-203ENST00000409747 SMARCA5O60264 1052 aaPredicted RBP17.75■□□□□ 0.43
CBX3-203ENST00000409747 PEX10O60683 326 aa17.75■□□□□ 0.43
CBX3-203ENST00000409747 CCDC17Q96LX7 622 aa17.75■□□□□ 0.43
CBX3-203ENST00000409747 APBA2Q99767 749 aa17.75■□□□□ 0.43
CBX3-203ENST00000409747 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
CBX3-203ENST00000409747 BAZ2AQ9UIF9 1905 aaKnown RBP17.74■□□□□ 0.43
CBX3-203ENST00000409747 PRKAB2O43741 272 aa17.74■□□□□ 0.43
CBX3-203ENST00000409747 CYP2D6P10635 497 aa17.74■□□□□ 0.43
CBX3-203ENST00000409747 MORN1Q5T089 497 aa17.74■□□□□ 0.43
CBX3-203ENST00000409747 ARHGEF10LQ9HCE6 1279 aa17.74■□□□□ 0.43
CBX3-203ENST00000409747 COLQQ9Y215 455 aaPredicted RBP17.74■□□□□ 0.43
CBX3-203ENST00000409747 PRKAR2AP13861 404 aaKnown RBP17.73■□□□□ 0.43
CBX3-203ENST00000409747 EVX2Q03828 476 aa17.73■□□□□ 0.43
CBX3-203ENST00000409747 MAP3K21Q5TCX8 1036 aa17.73■□□□□ 0.43
CBX3-203ENST00000409747 C12orf60Q5U649 245 aa17.73■□□□□ 0.43
CBX3-203ENST00000409747 NECAB2Q7Z6G3 386 aa17.73■□□□□ 0.43
CBX3-203ENST00000409747 SLC44A5Q8NCS7 719 aa17.73■□□□□ 0.43
CBX3-203ENST00000409747 LPAR1Q92633 364 aa17.73■□□□□ 0.43
CBX3-203ENST00000409747 USP6NLQ92738 828 aa17.73■□□□□ 0.43
CBX3-203ENST00000409747 SLC4A4Q9Y6R1 1079 aa17.73■□□□□ 0.43
CBX3-203ENST00000409747 SPDYE16A6NNV3 312 aaPredicted RBP17.72■□□□□ 0.43
CBX3-203ENST00000409747 CNMDO75829 334 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 TRIM32Q13049 653 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 SLFNL1Q499Z3 407 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 POTEEQ6S8J3 1075 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 DYNLL2Q96FJ2 89 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 HOXC10Q9NYD6 342 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 ARPP21Q9UBL0 812 aaPredicted RBP17.72■□□□□ 0.43
CBX3-203ENST00000409747 IVNS1ABPQ9Y6Y0 642 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 CEP290O15078 2479 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 USP17L12C9JPN9 530 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 USP17L21D6R901 530 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 EVI5O60447 810 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 ICA1Q05084 483 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 MAP2K5Q13163 448 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 WDR78Q5VTH9 848 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 PAWRQ96IZ0 340 aaKnown RBP17.72■□□□□ 0.43
CBX3-203ENST00000409747 TANGO6Q9C0B7 1094 aa17.72■□□□□ 0.43
CBX3-203ENST00000409747 A0A1W2PRG0 241 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms