RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 MYH4Q9Y623 1939 aa37.18■■■■□ 3.54
TRAF3IP1-203ENST00000409739 SP3Q02447 781 aa37.18■■■■□ 3.54
TRAF3IP1-203ENST00000409739 CWC27Q6UX04 472 aaKnown RBP37.18■■■■□ 3.54
TRAF3IP1-203ENST00000409739 ACER1Q8TDN7 264 aa37.18■■■■□ 3.54
TRAF3IP1-203ENST00000409739 TMOD4Q9NZQ9 345 aa37.18■■■■□ 3.54
TRAF3IP1-203ENST00000409739 IFFO2Q5TF58 517 aa37.17■■■■□ 3.54
TRAF3IP1-203ENST00000409739 CTU1Q7Z7A3 348 aaKnown RBP37.17■■■■□ 3.54
TRAF3IP1-203ENST00000409739 FEZ1Q99689 392 aa37.17■■■■□ 3.54
TRAF3IP1-203ENST00000409739 RASA1P20936 1047 aa37.16■■■■□ 3.54
TRAF3IP1-203ENST00000409739 PPARAQ07869 468 aa37.16■■■■□ 3.54
TRAF3IP1-203ENST00000409739 HSPD1P10809 573 aaKnown RBP37.15■■■■□ 3.54
TRAF3IP1-203ENST00000409739 ALX1Q15699 326 aa37.15■■■■□ 3.54
TRAF3IP1-203ENST00000409739 USP17L2Q6R6M4 530 aa37.15■■■■□ 3.54
TRAF3IP1-203ENST00000409739 C17orf99Q6UX52 265 aa37.15■■■■□ 3.54
TRAF3IP1-203ENST00000409739 CLEC10AQ8IUN9 316 aa37.15■■■■□ 3.54
TRAF3IP1-203ENST00000409739 KIAA1683Q9H0B3 1180 aa37.15■■■■□ 3.54
TRAF3IP1-203ENST00000409739 EMILIN3Q9NT22 766 aa37.15■■■■□ 3.54
TRAF3IP1-203ENST00000409739 CPA4Q9UI42 421 aa37.15■■■■□ 3.54
TRAF3IP1-203ENST00000409739 MFAP1P55081 439 aaKnown RBP37.14■■■■□ 3.54
TRAF3IP1-203ENST00000409739 ZYXQ15942 572 aaKnown RBP37.14■■■■□ 3.54
TRAF3IP1-203ENST00000409739 CD99L2Q8TCZ2 262 aa37.14■■■■□ 3.54
TRAF3IP1-203ENST00000409739 ERO1AQ96HE7 468 aa37.14■■■■□ 3.54
TRAF3IP1-203ENST00000409739 MCOLN1Q9GZU1 580 aa37.14■■■■□ 3.54
TRAF3IP1-203ENST00000409739 SKAP1Q86WV1 359 aa37.13■■■■□ 3.53
TRAF3IP1-203ENST00000409739 C12orf42Q96LP6 360 aa37.13■■■■□ 3.53
TRAF3IP1-203ENST00000409739 MKNK2Q9HBH9 465 aa37.13■■■■□ 3.53
TRAF3IP1-203ENST00000409739 PNMA3Q9UL41 463 aa37.13■■■■□ 3.53
TRAF3IP1-203ENST00000409739 ZMYM6O95789 1325 aa37.12■■■■□ 3.53
TRAF3IP1-203ENST00000409739 CAP1Q01518 475 aa37.12■■■■□ 3.53
TRAF3IP1-203ENST00000409739 ICA1Q05084 483 aa37.12■■■■□ 3.53
TRAF3IP1-203ENST00000409739 PABPC4Q13310 644 aaKnown RBP eCLIP37.12■■■■□ 3.53
TRAF3IP1-203ENST00000409739 A0A1W2PRG0 241 aa37.11■■■■□ 3.53
TRAF3IP1-203ENST00000409739 USP14P54578 494 aa37.11■■■■□ 3.53
TRAF3IP1-203ENST00000409739 ZNF287Q9HBT7 754 aa37.11■■■■□ 3.53
TRAF3IP1-203ENST00000409739 PRDM1O75626 825 aa37.1■■■■□ 3.53
TRAF3IP1-203ENST00000409739 FGAP02671 866 aa37.1■■■■□ 3.53
TRAF3IP1-203ENST00000409739 SLC3A2P08195 630 aaKnown RBP37.1■■■■□ 3.53
TRAF3IP1-203ENST00000409739 SMCR8Q8TEV9 937 aaPredicted RBP37.1■■■■□ 3.53
TRAF3IP1-203ENST00000409739 GNL3Q9BVP2 549 aaKnown RBP eCLIP37.1■■■■□ 3.53
TRAF3IP1-203ENST00000409739 ASCC2Q9H1I8 757 aaPredicted RBP37.1■■■■□ 3.53
TRAF3IP1-203ENST00000409739 PARP14Q460N5 1801 aa37.1■■■■□ 3.53
TRAF3IP1-203ENST00000409739 BCRP11274 1271 aa37.09■■■■□ 3.53
TRAF3IP1-203ENST00000409739 SIAH1Q8IUQ4 282 aa37.09■■■■□ 3.53
TRAF3IP1-203ENST00000409739 HOXA7P31268 230 aaPredicted RBP37.08■■■■□ 3.53
TRAF3IP1-203ENST00000409739 CTDSPL2Q05D32 466 aa37.08■■■■□ 3.53
TRAF3IP1-203ENST00000409739 PDE4BQ07343 736 aa37.08■■■■□ 3.53
TRAF3IP1-203ENST00000409739 IL25Q9H293 177 aa37.08■■■■□ 3.53
TRAF3IP1-203ENST00000409739 ANAPC4Q9UJX5 808 aa37.08■■■■□ 3.53
TRAF3IP1-203ENST00000409739 OSBPP22059 807 aa37.07■■■■□ 3.52
TRAF3IP1-203ENST00000409739 LACTBP83111 547 aaPredicted RBP37.07■■■■□ 3.52
TRAF3IP1-203ENST00000409739 KANSL2Q9H9L4 492 aa37.07■■■■□ 3.52
TRAF3IP1-203ENST00000409739 ARHGEF10LQ9HCE6 1279 aa37.07■■■■□ 3.52
TRAF3IP1-203ENST00000409739 RLFQ13129 1914 aa37.06■■■■□ 3.52
TRAF3IP1-203ENST00000409739 VCAM1P19320 739 aa37.06■■■■□ 3.52
TRAF3IP1-203ENST00000409739 IRX3P78415 501 aaPredicted RBP37.06■■■■□ 3.52
TRAF3IP1-203ENST00000409739 OTOP1Q7RTM1 612 aa37.06■■■■□ 3.52
TRAF3IP1-203ENST00000409739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP37.06■■■■□ 3.52
TRAF3IP1-203ENST00000409739 TRIM17Q9Y577 477 aa37.06■■■■□ 3.52
TRAF3IP1-203ENST00000409739 HTTP42858 3142 aa37.06■■■■□ 3.52
TRAF3IP1-203ENST00000409739 PLIN4Q96Q06 1357 aa37.05■■■■□ 3.52
TRAF3IP1-203ENST00000409739 CHMLP26374 656 aa37.05■■■■□ 3.52
TRAF3IP1-203ENST00000409739 ZNF444Q8N0Y2 327 aaPredicted RBP37.05■■■■□ 3.52
TRAF3IP1-203ENST00000409739 ARHGAP39Q9C0H5 1083 aa37.05■■■■□ 3.52
TRAF3IP1-203ENST00000409739 DOCK3Q8IZD9 2030 aa37.05■■■■□ 3.52
TRAF3IP1-203ENST00000409739 RAD50Q92878 1312 aa37.05■■■■□ 3.52
TRAF3IP1-203ENST00000409739 EEF2P13639 858 aaKnown RBP37.04■■■■□ 3.52
TRAF3IP1-203ENST00000409739 TMX2Q9Y320 296 aa37.04■■■■□ 3.52
TRAF3IP1-203ENST00000409739 TACC3Q9Y6A5 838 aa37.04■■■■□ 3.52
TRAF3IP1-203ENST00000409739 PKN2Q16513 984 aaKnown RBP37.03■■■■□ 3.52
TRAF3IP1-203ENST00000409739 SH2D4AQ9H788 454 aa37.03■■■■□ 3.52
TRAF3IP1-203ENST00000409739 EFCC1Q9HA90 598 aa37.03■■■■□ 3.52
TRAF3IP1-203ENST00000409739 IGKV6D-41A0A0C4DH26 115 aa37.02■■■■□ 3.52
TRAF3IP1-203ENST00000409739 ABHD8Q96I13 439 aa37.02■■■■□ 3.52
TRAF3IP1-203ENST00000409739 GCLCP48506 637 aaPredicted RBP37.01■■■■□ 3.52
TRAF3IP1-203ENST00000409739 ATP2B2Q01814 1243 aa37.01■■■■□ 3.52
TRAF3IP1-203ENST00000409739 KIF22Q14807 665 aa37.01■■■■□ 3.52
TRAF3IP1-203ENST00000409739 KIAA1755Q5JYT7 1200 aa37.01■■■■□ 3.52
TRAF3IP1-203ENST00000409739 ANKRD13CQ8N6S4 541 aa37.01■■■■□ 3.52
TRAF3IP1-203ENST00000409739 DSCC1Q9BVC3 393 aa37.01■■■■□ 3.52
TRAF3IP1-203ENST00000409739 INCENPQ9NQS7 918 aa37.01■■■■□ 3.52
TRAF3IP1-203ENST00000409739 USP17L15C9J2P7 530 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 USP17L13C9JLJ4 530 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 USP17L11C9JVI0 530 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 USP17L18D6R9N7 530 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 USP17L22D6RA61 530 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 USP17L17D6RBQ6 530 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 USP17L19D6RCP7 530 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 USP17L20D6RJB6 530 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 CTGFP29279 349 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 HAND2P61296 217 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 USP17L24Q0WX57 530 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 P2RX7Q99572 595 aaKnown RBP37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 VCPKMTQ9H867 229 aa37■■■■□ 3.51
TRAF3IP1-203ENST00000409739 A0A0G2JMZ2 1700 aa36.99■■■■□ 3.51
TRAF3IP1-203ENST00000409739 HERVK_113P62684 666 aa36.99■■■■□ 3.51
TRAF3IP1-203ENST00000409739 FAM110CQ1W6H9 321 aa36.99■■■■□ 3.51
TRAF3IP1-203ENST00000409739 FAM47AQ5JRC9 791 aa36.99■■■■□ 3.51
TRAF3IP1-203ENST00000409739 ERICH6BQ5W0A0 696 aa36.99■■■■□ 3.51
TRAF3IP1-203ENST00000409739 RUFY2Q8WXA3 655 aa36.99■■■■□ 3.51
TRAF3IP1-203ENST00000409739 RPAP3Q9H6T3 665 aaPredicted RBP36.99■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms