RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ELOA2Q8IYF1 753 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-205ENST00000409455 VGLL2Q8N8G2 317 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 MAP3K14Q99558 947 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.54■□□□□ 0.4
LIMS2-205ENST00000409455 MYH3P11055 1940 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 RGL2O15211 777 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 PDE8BO95263 885 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 FMR1Q06787 632 aaKnown RBP eCLIP17.54■□□□□ 0.4
LIMS2-205ENST00000409455 ZNF569Q5MCW4 686 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 TTC39AQ5SRH9 613 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 HELBQ8NG08 1087 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-205ENST00000409455 PPM1EQ8WY54 764 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 SUGCTQ9HAC7 445 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 MED4Q9NPJ6 270 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 MAN1B1Q9UKM7 699 aa17.54■□□□□ 0.4
LIMS2-205ENST00000409455 RHOXF2BP0C7M4 288 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 POSTNQ15063 836 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 KRT40Q6A162 431 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 WWC2Q6AWC2 1192 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 FOXR1Q6PIV2 292 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 PPFIBP1Q86W92 1011 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 SETDB2Q96T68 719 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 RHOXF2Q9BQY4 288 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 BRMS1Q9HCU9 246 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 TRAPPC3LQ5T215 181 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 TRMT44Q8IYL2 757 aaKnown RBP17.53■□□□□ 0.4
LIMS2-205ENST00000409455 OSBP2Q969R2 916 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 AIFM3Q96NN9 605 aa17.53■□□□□ 0.4
LIMS2-205ENST00000409455 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.53■□□□□ 0.4
LIMS2-205ENST00000409455 CTAGE15A4D2H0 777 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 FOXN1O15353 648 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 CTAGE8P0CG41 777 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 RFC4P35249 363 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 VSNL1P62760 191 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 TRIM29Q14134 588 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 NR1I3Q14994 352 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 ZNF772Q68DY9 489 aaPredicted RBP17.52■□□□□ 0.4
LIMS2-205ENST00000409455 CPLX2Q6PUV4 134 aaKnown RBP17.52■□□□□ 0.4
LIMS2-205ENST00000409455 C3orf67Q6ZVT6 689 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 CTAGE6Q86UF2 777 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 CTAGE4Q8IX94 777 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 KRI1Q8N9T8 703 aaKnown RBP17.52■□□□□ 0.4
LIMS2-205ENST00000409455 JRKLQ9Y4A0 524 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 ZMYM6O95789 1325 aa17.52■□□□□ 0.4
LIMS2-205ENST00000409455 ANTXR2P58335 489 aa17.52■□□□□ 0.39
LIMS2-205ENST00000409455 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.39
LIMS2-205ENST00000409455 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.39
LIMS2-205ENST00000409455 RAD9BQ6WBX8 426 aa17.52■□□□□ 0.39
LIMS2-205ENST00000409455 PACS2Q86VP3 889 aa17.52■□□□□ 0.39
LIMS2-205ENST00000409455 ZBTB9Q96C00 473 aa17.52■□□□□ 0.39
LIMS2-205ENST00000409455 WDR19Q8NEZ3 1342 aa17.52■□□□□ 0.39
LIMS2-205ENST00000409455 A0A1B0GTH6 734 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 LY75O60449 1722 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 PHACTR2O75167 634 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 WASHC4Q2M389 1173 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 BCORQ6W2J9 1755 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 FGAP02671 866 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 METAP2P50579 478 aaKnown RBP eCLIP17.51■□□□□ 0.39
LIMS2-205ENST00000409455 CORO7P57737 925 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 SCARF1Q14162 830 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 WHAMMP3Q1A5X7 153 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 TRIML1Q8N9V2 468 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 FAM204AQ9H8W3 233 aa17.51■□□□□ 0.39
LIMS2-205ENST00000409455 SAMSN1Q9NSI8 373 aaKnown RBP17.51■□□□□ 0.39
LIMS2-205ENST00000409455 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 SNAP23O00161 211 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 TRDNQ13061 729 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 NT5DC1Q5TFE4 455 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 LRRC31Q6UY01 552 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 RASGRP2Q7LDG7 609 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 IGSF22Q8N9C0 903 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.5■□□□□ 0.39
LIMS2-205ENST00000409455 GEMIN8Q9NWZ8 242 aaKnown RBP17.5■□□□□ 0.39
LIMS2-205ENST00000409455 TTF2Q9UNY4 1162 aaKnown RBP17.5■□□□□ 0.39
LIMS2-205ENST00000409455 ZNF213O14771 459 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 IGHMBP2P38935 993 aaKnown RBP17.5■□□□□ 0.39
LIMS2-205ENST00000409455 MORC3Q14149 939 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 NBPF5PQ86XG9 351 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-205ENST00000409455 CCDC24Q8N4L8 307 aa17.5■□□□□ 0.39
LIMS2-205ENST00000409455 NAPGQ99747 312 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-205ENST00000409455 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 C4AP0C0L4 1744 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 C4BP0C0L5 1744 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 RBL2Q08999 1139 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 ZNF827Q17R98 1081 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 RTL9Q8NET4 1388 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
LIMS2-205ENST00000409455 ZFYP08048 801 aaPredicted RBP17.49■□□□□ 0.39
LIMS2-205ENST00000409455 PLCD1P51178 756 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 SF3B3Q15393 1217 aaKnown RBP17.49■□□□□ 0.39
LIMS2-205ENST00000409455 SPECC1Q5M775 1068 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 SLC10A5Q5PT55 438 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 PI16Q6UXB8 463 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 SLC35F6Q8N357 371 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 CPLX3Q8WVH0 158 aa17.49■□□□□ 0.39
LIMS2-205ENST00000409455 ANGEL1Q9UNK9 670 aaKnown RBP17.49■□□□□ 0.39
LIMS2-205ENST00000409455 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
LIMS2-205ENST00000409455 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 A0A0U1RQJ8 604 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms