RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 RUFY2Q8WXA3 655 aa17.12■□□□□ 0.33
COPS7B-205ENST00000409295 MCOLN1Q9GZU1 580 aa17.12■□□□□ 0.33
COPS7B-205ENST00000409295 KIAA1683Q9H0B3 1180 aa17.12■□□□□ 0.33
COPS7B-205ENST00000409295 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
COPS7B-205ENST00000409295 EFCC1Q9HA90 598 aa17.12■□□□□ 0.33
COPS7B-205ENST00000409295 CPA4Q9UI42 421 aa17.12■□□□□ 0.33
COPS7B-205ENST00000409295 DOCK1Q14185 1865 aa17.12■□□□□ 0.33
COPS7B-205ENST00000409295 GUCY1A2P33402 732 aa17.11■□□□□ 0.33
COPS7B-205ENST00000409295 PPARAQ07869 468 aa17.11■□□□□ 0.33
COPS7B-205ENST00000409295 ZYXQ15942 572 aaKnown RBP17.11■□□□□ 0.33
COPS7B-205ENST00000409295 TREML2Q5T2D2 321 aa17.11■□□□□ 0.33
COPS7B-205ENST00000409295 CD99L2Q8TCZ2 262 aa17.11■□□□□ 0.33
COPS7B-205ENST00000409295 CCDC171Q6TFL3 1326 aa17.11■□□□□ 0.33
COPS7B-205ENST00000409295 CASP8AP2Q9UKL3 1982 aa17.11■□□□□ 0.33
COPS7B-205ENST00000409295 NAV1Q8NEY1 1877 aa17.1■□□□□ 0.33
COPS7B-205ENST00000409295 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
COPS7B-205ENST00000409295 HSPD1P10809 573 aaKnown RBP17.1■□□□□ 0.33
COPS7B-205ENST00000409295 HOXA7P31268 230 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-205ENST00000409295 GCLCP48506 637 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-205ENST00000409295 ATP2B2Q01814 1243 aa17.1■□□□□ 0.33
COPS7B-205ENST00000409295 ICA1Q05084 483 aa17.1■□□□□ 0.33
COPS7B-205ENST00000409295 VPS53Q5VIR6 699 aa17.1■□□□□ 0.33
COPS7B-205ENST00000409295 ACER1Q8TDN7 264 aa17.1■□□□□ 0.33
COPS7B-205ENST00000409295 EMILIN3Q9NT22 766 aa17.1■□□□□ 0.33
COPS7B-205ENST00000409295 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
COPS7B-205ENST00000409295 USP17L15C9J2P7 530 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 USP17L13C9JLJ4 530 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 USP17L11C9JVI0 530 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 USP17L18D6R9N7 530 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 USP17L22D6RA61 530 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 USP17L17D6RBQ6 530 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 USP17L19D6RCP7 530 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 USP17L20D6RJB6 530 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 FGAP02671 866 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 RASA1P20936 1047 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 HOXD10P28358 340 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 USP17L24Q0WX57 530 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 ERICH6BQ5W0A0 696 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 ASCC2Q9H1I8 757 aaPredicted RBP17.09■□□□□ 0.33
COPS7B-205ENST00000409295 SIPA1L1O43166 1804 aa17.09■□□□□ 0.33
COPS7B-205ENST00000409295 PRDM1O75626 825 aa17.08■□□□□ 0.32
COPS7B-205ENST00000409295 FMNL1O95466 1100 aaPredicted RBP17.08■□□□□ 0.32
COPS7B-205ENST00000409295 GNRH1P01148 92 aa17.08■□□□□ 0.32
COPS7B-205ENST00000409295 GSPT1P15170 499 aaKnown RBP17.08■□□□□ 0.32
COPS7B-205ENST00000409295 LACTBP83111 547 aaPredicted RBP17.08■□□□□ 0.32
COPS7B-205ENST00000409295 ZNF589Q86UQ0 364 aaPredicted RBP17.08■□□□□ 0.32
COPS7B-205ENST00000409295 GTF3C2Q8WUA4 911 aaPredicted RBP17.08■□□□□ 0.32
COPS7B-205ENST00000409295 C12orf42Q96LP6 360 aa17.08■□□□□ 0.32
COPS7B-205ENST00000409295 ROBO3Q96MS0 1386 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 TSPY3P0CV98 308 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 TSPY8P0CW00 308 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 EEF2P13639 858 aaKnown RBP17.07■□□□□ 0.32
COPS7B-205ENST00000409295 PSMC4P43686 418 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 TFAP4Q01664 338 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 CTDSPL2Q05D32 466 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 PPP4R3BQ5MIZ7 849 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 FBXO46Q6PJ61 603 aaPredicted RBP17.07■□□□□ 0.32
COPS7B-205ENST00000409295 OTOP1Q7RTM1 612 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 LPAR1Q92633 364 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 ABHD8Q96I13 439 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 P2RX7Q99572 595 aaKnown RBP17.07■□□□□ 0.32
COPS7B-205ENST00000409295 TOMM22Q9NS69 142 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 CTNNA3Q9UI47 895 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 ANAPC4Q9UJX5 808 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 TMX2Q9Y320 296 aa17.07■□□□□ 0.32
COPS7B-205ENST00000409295 BAZ2AQ9UIF9 1905 aaKnown RBP17.06■□□□□ 0.32
COPS7B-205ENST00000409295 A0A1W2PRG0 241 aa17.06■□□□□ 0.32
COPS7B-205ENST00000409295 RAD21O60216 631 aa17.06■□□□□ 0.32
COPS7B-205ENST00000409295 BCRP11274 1271 aa17.06■□□□□ 0.32
COPS7B-205ENST00000409295 FCGRTP55899 365 aa17.06■□□□□ 0.32
COPS7B-205ENST00000409295 CATSPERGQ6ZRH7 1159 aa17.06■□□□□ 0.32
COPS7B-205ENST00000409295 ANKRD13CQ8N6S4 541 aa17.06■□□□□ 0.32
COPS7B-205ENST00000409295 GOPCQ9HD26 462 aa17.06■□□□□ 0.32
COPS7B-205ENST00000409295 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
COPS7B-205ENST00000409295 LAMB1P07942 1786 aa17.06■□□□□ 0.32
COPS7B-205ENST00000409295 ADGRA2Q96PE1 1338 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 TSPY2A6NKD2 308 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 ZNF213O14771 459 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 FOXP2O15409 715 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
COPS7B-205ENST00000409295 ECM2O94769 699 aaPredicted RBP17.05■□□□□ 0.32
COPS7B-205ENST00000409295 CHMLP26374 656 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 PRMT2P55345 433 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 SIAH1Q8IUQ4 282 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 CCAR1Q8IX12 1150 aaKnown RBP17.05■□□□□ 0.32
COPS7B-205ENST00000409295 NEDD1Q8NHV4 660 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 DSCC1Q9BVC3 393 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 RNF41Q9H4P4 317 aaPredicted RBP17.05■□□□□ 0.32
COPS7B-205ENST00000409295 RPAP3Q9H6T3 665 aaPredicted RBP17.05■□□□□ 0.32
COPS7B-205ENST00000409295 VCPKMTQ9H867 229 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 HOXC10Q9NYD6 342 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
COPS7B-205ENST00000409295 DDX60LQ5H9U9 1706 aaKnown RBP17.04■□□□□ 0.32
COPS7B-205ENST00000409295 ZMYM6O95789 1325 aa17.04■□□□□ 0.32
COPS7B-205ENST00000409295 RAD50Q92878 1312 aa17.04■□□□□ 0.32
COPS7B-205ENST00000409295 CCDC85CA6NKD9 419 aa17.04■□□□□ 0.32
COPS7B-205ENST00000409295 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
COPS7B-205ENST00000409295 VCAM1P19320 739 aa17.04■□□□□ 0.32
COPS7B-205ENST00000409295 HERVK_113P62684 666 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms