RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 BARGINQ6ZT62 677 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 SPICE1Q8N0Z3 855 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 UIMC1Q96RL1 719 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 RPS6KC1Q96S38 1066 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 NAA15Q9BXJ9 866 aaKnown RBP5.62□□□□□ -1.51
SCN3A-203ENST00000409101 FTOQ9C0B1 505 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCN3A-203ENST00000409101 KAT6BQ8WYB5 2073 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 PNMA6EA0A0J9YXQ4 647 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 GOLGA6L10A0A0M3HER8 536 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 YWHAEP62258 255 aaKnown RBP5.62□□□□□ -1.51
SCN3A-203ENST00000409101 POLA2Q14181 598 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 EZH2Q15910 746 aaKnown RBP5.62□□□□□ -1.51
SCN3A-203ENST00000409101 SLFN12Q8IYM2 578 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 FAM227BQ96M60 508 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 CCDC113Q9H0I3 377 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 KCNH4Q9UQ05 1017 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 CPSF1Q10570 1443 aaKnown RBP5.62□□□□□ -1.51
SCN3A-203ENST00000409101 A0A0G2JLW4 131 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 PHKA1P46020 1223 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 PROSER3Q2NL68 480 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 KIF4BQ2VIQ3 1234 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 LMBR1Q8WVP7 490 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 MYL10Q9BUA6 226 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 IKBKGQ9Y6K9 419 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 TULP4Q9NRJ4 1543 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 ALKQ9UM73 1620 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 H0YCG3 227 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 DAPK3O43293 454 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 EIF3JO75822 258 aaKnown RBP5.62□□□□□ -1.51
SCN3A-203ENST00000409101 DDAH1O94760 285 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 CRKP46108 304 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 IFFO1Q0D2I5 559 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 PRR16Q569H4 304 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 EHBP1Q8NDI1 1231 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 RAET1EQ8TD07 263 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 KANSL2Q9H9L4 492 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 GDPD2Q9HCC8 539 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 RTEL1Q9NZ71 1219 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 RNF123Q5XPI4 1314 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 PER1O15534 1290 aaPredicted RBP5.62□□□□□ -1.51
SCN3A-203ENST00000409101 KCNQ2O43526 872 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 STAMBPO95630 424 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 PCP11498 1178 aaKnown RBP5.62□□□□□ -1.51
SCN3A-203ENST00000409101 FERP16591 822 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 MCM4P33991 863 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 XKR9Q5GH70 373 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 SESTD1Q86VW0 696 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 PLA2G4DQ86XP0 818 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 SUGCTQ9HAC7 445 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 AKT3Q9Y243 479 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 PLA2R1Q13018 1463 aa5.62□□□□□ -1.51
SCN3A-203ENST00000409101 KDM3AQ9Y4C1 1321 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 PRAMEF22A3QJZ6 481 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 F13A1P00488 732 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 ZNF157P51786 506 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 POLGP54098 1239 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 ODR4Q5SWX8 454 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 GSTA5Q7RTV2 222 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 SKAP1Q86WV1 359 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 EXOC8Q8IYI6 725 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 NSMCE1Q8WV22 266 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 SREK1Q8WXA9 508 aaKnown RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 PUS3Q9BZE2 481 aaKnown RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 SASH1O94885 1247 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 RLBP1P12271 317 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 MCM3P25205 808 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 CYLC1P35663 651 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 ARL1P40616 181 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 GSDMDP57764 484 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 RNASELQ05823 741 aaKnown RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 RAPGEF1Q13905 1077 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 Q3C1V9 767 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 SPATA31A5Q5VU36 1347 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 SPATA31A7Q8IWB4 1347 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 TRAF5O00463 557 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 TNNC2P02585 160 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 GOLGA8HP0CJ92 632 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 CHRNA5P30532 468 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 KRT9P35527 623 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 KIAA0753Q2KHM9 967 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 ASPRV1Q53RT3 343 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 LIN9Q5TKA1 542 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 DYDC1Q8WWB3 177 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 WRNIP1Q96S55 665 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 RIOK1Q9BRS2 568 aaKnown RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 BRIP1Q9BX63 1249 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 MRPL44Q9H9J2 332 aaKnown RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 SPATA31E1Q6ZUB1 1445 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 CSPG5O95196 566 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 STAT2P52630 851 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 FAM160B2Q86V87 743 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 FOXP4Q8IVH2 680 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 PNMA1Q8ND90 353 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 GTF3C6Q969F1 213 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 HAUS7Q99871 368 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 JPH2Q9BR39 696 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 GPR108Q9NPR9 543 aa5.61□□□□□ -1.51
SCN3A-203ENST00000409101 RNF216Q9NWF9 866 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 KIF2AO00139 706 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-203ENST00000409101 GCNT3O95395 438 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms