RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 SNRKQ9NRH2 765 aa15.02■□□□□ -0
APOBEC3B-204ENST00000407298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.02■□□□□ -0
APOBEC3B-204ENST00000407298 U3KPZ7 1027 aaPredicted RBP15.02■□□□□ -0
APOBEC3B-204ENST00000407298 LAMA2P24043 3122 aaKnown RBP15.02□□□□□ -0.01
APOBEC3B-204ENST00000407298 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 PEX10O60683 326 aa15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 GH2P01242 217 aa15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 JAG1P78504 1218 aa15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 OS9Q13438 667 aaPredicted RBP15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 WDR78Q5VTH9 848 aa15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 TMED8Q6PL24 325 aaPredicted RBP15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 LPAR1Q92633 364 aa15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 ZNF512BQ96KM6 892 aaPredicted RBP15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 DDX20Q9UHI6 824 aaKnown RBP15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 SAP30BPQ9UHR5 308 aaKnown RBP15.01□□□□□ -0.01
APOBEC3B-204ENST00000407298 UNC80Q8N2C7 3258 aa15□□□□□ -0.01
APOBEC3B-204ENST00000407298 CYP2E1P05181 493 aaPredicted RBP15□□□□□ -0.01
APOBEC3B-204ENST00000407298 HOXC6P09630 235 aa15□□□□□ -0.01
APOBEC3B-204ENST00000407298 PTPREP23469 700 aa15□□□□□ -0.01
APOBEC3B-204ENST00000407298 CNGA1P29973 690 aa15□□□□□ -0.01
APOBEC3B-204ENST00000407298 USP5P45974 858 aa15□□□□□ -0.01
APOBEC3B-204ENST00000407298 CATSPERGQ6ZRH7 1159 aa15□□□□□ -0.01
APOBEC3B-204ENST00000407298 PHF6Q8IWS0 365 aaKnown RBP eCLIP15□□□□□ -0.01
APOBEC3B-204ENST00000407298 KIAA1683Q9H0B3 1180 aa15□□□□□ -0.01
APOBEC3B-204ENST00000407298 CABP5Q9NP86 173 aa15□□□□□ -0.01
APOBEC3B-204ENST00000407298 PNMA6EA0A0J9YXQ4 647 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 DNM1LO00429 736 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 CYP7A1P22680 504 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 CERKLQ49MI3 558 aaPredicted RBP14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 TNNI3KQ59H18 835 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 ZNF697Q5TEC3 545 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 TATDN1Q6P1N9 297 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 LBX2Q6XYB7 198 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 TTC6Q86TZ1 520 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 ARRDC4Q8NCT1 418 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 SERPINB13Q9UIV8 391 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 FPGT-TNNI3KV9GXZ4 949 aa14.99□□□□□ -0.01
APOBEC3B-204ENST00000407298 STRNO43815 780 aa14.98□□□□□ -0.01
APOBEC3B-204ENST00000407298 RAB3GAP1Q15042 981 aa14.98□□□□□ -0.01
APOBEC3B-204ENST00000407298 ZYXQ15942 572 aaKnown RBP14.98□□□□□ -0.01
APOBEC3B-204ENST00000407298 SHROOM1Q2M3G4 852 aaPredicted RBP14.98□□□□□ -0.01
APOBEC3B-204ENST00000407298 ADGRA1Q86SQ6 560 aa14.98□□□□□ -0.01
APOBEC3B-204ENST00000407298 DBNDD2Q9BQY9 259 aa14.98□□□□□ -0.01
APOBEC3B-204ENST00000407298 EHD4Q9H223 541 aa14.98□□□□□ -0.01
APOBEC3B-204ENST00000407298 SLC5A4Q9NY91 659 aa14.98□□□□□ -0.01
APOBEC3B-204ENST00000407298 CNMDO75829 334 aa14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 VCAM1P19320 739 aa14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 ZAP70P43403 619 aa14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 ATN1P54259 1190 aaPredicted RBP14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 GRB14Q14449 540 aa14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 ABCB5Q2M3G0 1257 aa14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 POTEEQ6S8J3 1075 aa14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 DPP9Q86TI2 863 aa14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 COL25A1Q9BXS0 654 aaPredicted RBP14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 HOXC10Q9NYD6 342 aa14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 NDUFB9Q9Y6M9 179 aa14.97□□□□□ -0.01
APOBEC3B-204ENST00000407298 SIPA1L1O43166 1804 aa14.96□□□□□ -0.01
APOBEC3B-204ENST00000407298 MAST2Q6P0Q8 1798 aa14.96□□□□□ -0.01
APOBEC3B-204ENST00000407298 KBTBD13C9JR72 458 aa14.96□□□□□ -0.01
APOBEC3B-204ENST00000407298 TRIM27P14373 513 aa14.96□□□□□ -0.01
APOBEC3B-204ENST00000407298 DYNLL1P63167 89 aaKnown RBP14.96□□□□□ -0.01
APOBEC3B-204ENST00000407298 HNRNPUQ00839 825 aaKnown RBP eCLIP14.96□□□□□ -0.01
APOBEC3B-204ENST00000407298 OLFML2BQ68BL8 750 aa14.96□□□□□ -0.01
APOBEC3B-204ENST00000407298 FLRT1Q9NZU1 646 aa14.96□□□□□ -0.01
APOBEC3B-204ENST00000407298 FOCADQ5VW36 1801 aa14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 SURF6O75683 361 aaKnown RBP14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 IDH1O75874 414 aaKnown RBP14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 CYP2C19P33261 490 aa14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 RTP1P59025 263 aa14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 MAP3K12Q12852 859 aa14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 POLA2Q14181 598 aa14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 FRAT1Q92837 279 aaPredicted RBP14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 GUCD1Q96NT3 240 aa14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 RPAP3Q9H6T3 665 aaPredicted RBP14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 PIH1D3Q9NQM4 214 aaKnown RBP14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 BTBD7Q9P203 1132 aa14.95□□□□□ -0.02
APOBEC3B-204ENST00000407298 SPDYE16A6NNV3 312 aaPredicted RBP14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 ATP8B2P98198 1209 aa14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 COG2Q14746 738 aa14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 SLC39A5Q6ZMH5 540 aa14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 MAGEB6Q8N7X4 407 aa14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 MIGA1Q8NAN2 632 aa14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 NPLOC4Q8TAT6 608 aa14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 SSH3Q8TE77 659 aa14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 FAM161BQ96MY7 647 aa14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 ATP11BQ9Y2G3 1177 aa14.94□□□□□ -0.02
APOBEC3B-204ENST00000407298 CDK5RAP2Q96SN8 1893 aa14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 SEPT4O43236 478 aa14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 POLR3DP05423 398 aaPredicted RBP14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 CYBAP13498 195 aa14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 ADORA2AP29274 412 aa14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 GJC2Q5T442 439 aaPredicted RBP14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 MB21D1Q8N884 522 aa14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 SHCBP1Q8NEM2 672 aa14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 ACER1Q8TDN7 264 aa14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 NOP58Q9Y2X3 529 aaKnown RBP14.93□□□□□ -0.02
APOBEC3B-204ENST00000407298 MYH1P12882 1939 aa14.92□□□□□ -0.02
APOBEC3B-204ENST00000407298 SMAD3P84022 425 aaKnown RBP14.92□□□□□ -0.02
APOBEC3B-204ENST00000407298 ABRAQ8N0Z2 381 aa14.92□□□□□ -0.02
APOBEC3B-204ENST00000407298 TRPV1Q8NER1 839 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms