RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 GPAT2Q6NUI2 795 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 TMEM179Q6ZVK1 233 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 ANKRD23Q86SG2 305 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 TICAM2Q86XR7 235 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 ACER1Q8TDN7 264 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 WDR18Q9BV38 432 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 TBC1D2Q9BYX2 928 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 MKNK2Q9HBH9 465 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 GINM1Q9NU53 330 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 TMOD4Q9NZQ9 345 aa12.24□□□□□ -0.45
TSPAN9-202ENST00000407263 USP17L10C9JJH3 530 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 SLC3A2P08195 630 aaKnown RBP12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 CYP2C8P10632 490 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 BACE1P56817 501 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 BMP2KLQ5H9B9 411 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 COL13A1Q5TAT6 717 aaPredicted RBP12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 ERICH6BQ5W0A0 696 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 FASTKD5Q7L8L6 764 aaKnown RBP12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 TBC1D10CQ8IV04 446 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 ZNF296Q8WUU4 475 aaPredicted RBP12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 PARK7Q99497 189 aaKnown RBP12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 INCENPQ9NQS7 918 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 TOMM22Q9NS69 142 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 AGTPBP1Q9UPW5 1226 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 TACC3Q9Y6A5 838 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 MYH6P13533 1939 aa12.23□□□□□ -0.45
TSPAN9-202ENST00000407263 PLIN4Q96Q06 1357 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 DOCK3Q8IZD9 2030 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 ADGRA2Q96PE1 1338 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 GPR25O00155 361 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 FGAP02671 866 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 PDE4BQ07343 736 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 FAM47AQ5JRC9 791 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 RRP12Q5JTH9 1297 aaKnown RBP12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 PROCA1Q8NCQ7 364 aaPredicted RBP12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 CCDC17Q96LX7 622 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 PRDM10Q9NQV6 1147 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 CPA4Q9UI42 421 aa12.22□□□□□ -0.45
TSPAN9-202ENST00000407263 NEDD4P46934 1319 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 A0A1W2PRG0 241 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 RAD21O60216 631 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 TSPY3P0CV98 308 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 TSPY8P0CW00 308 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 ALX1Q15699 326 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 SH3D19Q5HYK7 790 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 USP17L2Q6R6M4 530 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 SMCR8Q8TEV9 937 aaPredicted RBP12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 DSCC1Q9BVC3 393 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 CFHR5Q9BXR6 569 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 ZNF287Q9HBT7 754 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 ZCCHC17Q9NP64 241 aaKnown RBP12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 EMILIN3Q9NT22 766 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 TAOK2Q9UL54 1235 aa12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.21□□□□□ -0.45
TSPAN9-202ENST00000407263 TSPY2A6NKD2 308 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 C19orf81C9J6K1 198 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 SGSM2O43147 1006 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 FKTNO75072 461 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 CDC45O75419 566 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 EEF2P13639 858 aaKnown RBP12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 VCAM1P19320 739 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 USP14P54578 494 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 IRX3P78415 501 aaPredicted RBP12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 PTH1RQ03431 593 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 SPICE1Q8N0Z3 855 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 LRRC47Q8N1G4 583 aaKnown RBP12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 CD99L2Q8TCZ2 262 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 KIAA1683Q9H0B3 1180 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 RBBP6Q7Z6E9 1792 aaKnown RBP12.2□□□□□ -0.46
TSPAN9-202ENST00000407263 NMT2O60551 498 aa12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 TLR2O60603 784 aa12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 TFAP4Q01664 338 aa12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 KIAA1755Q5JYT7 1200 aa12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 CEP95Q96GE4 821 aa12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 TANGO6Q9C0B7 1094 aa12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 ASCC2Q9H1I8 757 aaPredicted RBP12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 SH2D4AQ9H788 454 aa12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 PLXNA1Q9UIW2 1896 aa12.19□□□□□ -0.46
TSPAN9-202ENST00000407263 IGKV6D-41A0A0C4DH26 115 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 ZNF213O14771 459 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 PEX10O60683 326 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 OSBPP22059 807 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 CAP1Q01518 475 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 IMMTQ16891 758 aaKnown RBP12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 AKNAD1Q5T1N1 836 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 SIAH1Q8IUQ4 282 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms