RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 TMOD4Q9NZQ9 345 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 ARIH1Q9Y4X5 557 aaPredicted RBP11.58□□□□□ -0.56
NUP43-204ENST00000403890 MYO9BQ13459 2157 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 DOCK2Q92608 1830 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 GAKO14976 1311 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 SYNGAP1Q96PV0 1343 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 SALL1Q9NSC2 1324 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 RFX7Q2KHR2 1363 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 STK25O00506 426 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
NUP43-204ENST00000403890 BACE1P56817 501 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 IL27Q8NEV9 243 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 PPM1EQ8WY54 764 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 ZNF576Q9H609 170 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 CWC22Q9HCG8 908 aaKnown RBP11.57□□□□□ -0.56
NUP43-204ENST00000403890 THEGQ9P2T0 379 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 UTYO14607 1347 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 IL16Q14005 1332 aa11.57□□□□□ -0.56
NUP43-204ENST00000403890 MAST2Q6P0Q8 1798 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.56□□□□□ -0.56
NUP43-204ENST00000403890 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.56□□□□□ -0.56
NUP43-204ENST00000403890 TRIM43BA6NCK2 446 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 DNAJB2P25686 324 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 ATP2B2Q01814 1243 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 MTMR2Q13614 643 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 CCDC27Q2M243 656 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 TRIM60Q495X7 471 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 AKNAD1Q5T1N1 836 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 GJC2Q5T442 439 aaPredicted RBP11.56□□□□□ -0.56
NUP43-204ENST00000403890 SH3RF1Q7Z6J0 888 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 ZGPATQ8N5A5 531 aaKnown RBP11.56□□□□□ -0.56
NUP43-204ENST00000403890 ANKRD44Q8N8A2 993 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 GTF3C2Q8WUA4 911 aaPredicted RBP11.56□□□□□ -0.56
NUP43-204ENST00000403890 TRIM43Q96BQ3 446 aaPredicted RBP11.56□□□□□ -0.56
NUP43-204ENST00000403890 WDR18Q9BV38 432 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 PDLIM7Q9NR12 457 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 FLRT1Q9NZU1 646 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 DENND2AQ9ULE3 1009 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 LTBP2Q14767 1821 aa11.56□□□□□ -0.56
NUP43-204ENST00000403890 LOC285556D6RIA3 1793 aa11.55□□□□□ -0.56
NUP43-204ENST00000403890 C19orf81C9J6K1 198 aa11.55□□□□□ -0.56
NUP43-204ENST00000403890 KBTBD13C9JR72 458 aa11.55□□□□□ -0.56
NUP43-204ENST00000403890 EYA2O00167 538 aa11.55□□□□□ -0.56
NUP43-204ENST00000403890 SEMA3EO15041 775 aa11.55□□□□□ -0.56
NUP43-204ENST00000403890 PBX2P40425 430 aa11.55□□□□□ -0.56
NUP43-204ENST00000403890 BTDP43251 543 aa11.55□□□□□ -0.56
NUP43-204ENST00000403890 SNX17Q15036 470 aa11.55□□□□□ -0.56
NUP43-204ENST00000403890 DZIP1Q86YF9 867 aaKnown RBP11.55□□□□□ -0.56
NUP43-204ENST00000403890 GAS2L1Q99501 681 aaPredicted RBP11.55□□□□□ -0.56
NUP43-204ENST00000403890 PAGR1Q9BTK6 254 aa11.55□□□□□ -0.56
NUP43-204ENST00000403890 SLC15A5A6NIM6 579 aa11.54□□□□□ -0.56
NUP43-204ENST00000403890 RRP1BQ14684 758 aaKnown RBP11.54□□□□□ -0.56
NUP43-204ENST00000403890 C1orf53Q5VUE5 145 aa11.54□□□□□ -0.56
NUP43-204ENST00000403890 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
NUP43-204ENST00000403890 TIFAQ96CG3 184 aa11.54□□□□□ -0.56
NUP43-204ENST00000403890 HCN4Q9Y3Q4 1203 aa11.54□□□□□ -0.56
NUP43-204ENST00000403890 TACC3Q9Y6A5 838 aa11.54□□□□□ -0.56
NUP43-204ENST00000403890 GPR75-ASB3A0A0A6YYF3 556 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 ASNSP08243 561 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 HOXC6P09630 235 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 ITGB8P26012 769 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 CYP2C19P33261 490 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 EPHB4P54760 987 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 RHBDL3P58872 404 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 CCNA1P78396 465 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 TLE2Q04725 743 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 SPTY2D1Q68D10 685 aaPredicted RBP11.53□□□□□ -0.56
NUP43-204ENST00000403890 TRPV1Q8NER1 839 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 MFRPQ9BY79 579 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 ABCF2Q9UG63 623 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 HERC5Q9UII4 1024 aaKnown RBP11.53□□□□□ -0.56
NUP43-204ENST00000403890 NDUFB9Q9Y6M9 179 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 FANCIQ9NVI1 1328 aa11.53□□□□□ -0.56
NUP43-204ENST00000403890 MYH2Q9UKX2 1941 aa11.52□□□□□ -0.56
NUP43-204ENST00000403890 USP17L10C9JJH3 530 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 MAP4K4O95819 1239 aaPredicted RBP11.52□□□□□ -0.57
NUP43-204ENST00000403890 PTPREP23469 700 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 ADCYAP1R1P41586 468 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 PHKA1P46020 1223 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 EXOSC9Q06265 439 aaKnown RBP11.52□□□□□ -0.57
NUP43-204ENST00000403890 ATP2B3Q16720 1220 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 WDR78Q5VTH9 848 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 CEP126Q9P2H0 1117 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 RABGAP1Q9Y3P9 1069 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 MROH7-TTC4A0A0A0MT08 1334 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 MYH13Q9UKX3 1938 aa11.52□□□□□ -0.57
NUP43-204ENST00000403890 MUC6Q6W4X9 2439 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 RLFQ13129 1914 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 CYBAP13498 195 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 RAG1P15918 1043 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 FPGSQ05932 587 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 DDX10Q13206 875 aaKnown RBP11.51□□□□□ -0.57
NUP43-204ENST00000403890 CCDC85BQ15834 202 aaPredicted RBP11.51□□□□□ -0.57
NUP43-204ENST00000403890 ATG9AQ7Z3C6 839 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 NPLOC4Q8TAT6 608 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 FERMT2Q96AC1 680 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 PRDM12Q9H4Q4 367 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 PI4KBQ9UBF8 816 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 IVNS1ABPQ9Y6Y0 642 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms