RNA–Protein interactions for RNA: ENST00000403562.5

PRKAR1B-203, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1B, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-203ENST00000403562 RBM28Q9NW13 759 aaKnown RBP28.26■■■□□ 2.11
PRKAR1B-203ENST00000403562 MROH7-TTC4A0A0A0MT08 1334 aa28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 ARFGEF1Q9Y6D6 1849 aa28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 ZNF75DP51815 510 aa28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 SOGA3Q5TF21 947 aa28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 SARM1Q6SZW1 724 aa28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 DIS3L2Q8IYB7 885 aaKnown RBP28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 PIBF1Q8WXW3 757 aa28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 TRIM5Q9C035 493 aa28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 TTC12Q9H892 705 aaPredicted RBP28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 KIAA1468Q9P260 1216 aa28.25■■■□□ 2.11
PRKAR1B-203ENST00000403562 FAM237AA0A1B0GTK4 181 aa28.24■■■□□ 2.11
PRKAR1B-203ENST00000403562 SMIM22K7EJ46 135 aa28.24■■■□□ 2.11
PRKAR1B-203ENST00000403562 MARCKSP29966 332 aaPredicted RBP28.24■■■□□ 2.11
PRKAR1B-203ENST00000403562 GRIPAP1Q4V328 841 aa28.24■■■□□ 2.11
PRKAR1B-203ENST00000403562 TAOK2Q9UL54 1235 aa28.24■■■□□ 2.11
PRKAR1B-203ENST00000403562 RIMBP2O15034 1052 aa28.23■■■□□ 2.11
PRKAR1B-203ENST00000403562 CUTAO60888 179 aa28.23■■■□□ 2.11
PRKAR1B-203ENST00000403562 DDAH1O94760 285 aa28.23■■■□□ 2.11
PRKAR1B-203ENST00000403562 NT5C2P49902 561 aa28.23■■■□□ 2.11
PRKAR1B-203ENST00000403562 ZRSR1Q15695 479 aaKnown RBP28.23■■■□□ 2.11
PRKAR1B-203ENST00000403562 ZNF830Q96NB3 372 aaPredicted RBP28.23■■■□□ 2.11
PRKAR1B-203ENST00000403562 HPSEQ9Y251 543 aa28.23■■■□□ 2.11
PRKAR1B-203ENST00000403562 BTBD18B2RXH4 712 aa28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 AKAP17AQ02040 695 aaKnown RBP28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 RILPL1Q5EBL4 403 aa28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 ZNF804AQ7Z570 1209 aa28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 SPC24Q8NBT2 197 aa28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 PSMD1Q99460 953 aa28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 BECN2A8MW95 431 aa28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 XBP1P17861 261 aa28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 CDC25BP30305 580 aa28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 TERF1P54274 439 aa28.22■■■□□ 2.11
PRKAR1B-203ENST00000403562 FER1L6Q2WGJ9 1857 aa28.21■■■□□ 2.11
PRKAR1B-203ENST00000403562 PRDM1O75626 825 aa28.21■■■□□ 2.11
PRKAR1B-203ENST00000403562 LDHBP07195 334 aaKnown RBP28.21■■■□□ 2.11
PRKAR1B-203ENST00000403562 SYKP43405 635 aa28.21■■■□□ 2.11
PRKAR1B-203ENST00000403562 RESP18Q5W5W9 173 aa28.21■■■□□ 2.11
PRKAR1B-203ENST00000403562 KCNJ14Q9UNX9 436 aa28.21■■■□□ 2.11
PRKAR1B-203ENST00000403562 NFKBIEO00221 500 aa28.2■■■□□ 2.11
PRKAR1B-203ENST00000403562 GSTO1P78417 241 aa28.2■■■□□ 2.11
PRKAR1B-203ENST00000403562 PDE4BQ07343 736 aa28.2■■■□□ 2.11
PRKAR1B-203ENST00000403562 CMTR1Q8N1G2 835 aaKnown RBP28.2■■■□□ 2.11
PRKAR1B-203ENST00000403562 CCDC82Q8N4S0 544 aa28.2■■■□□ 2.11
PRKAR1B-203ENST00000403562 PRPF3O43395 683 aaKnown RBP28.2■■■□□ 2.1
PRKAR1B-203ENST00000403562 TROAPQ12815 778 aa28.2■■■□□ 2.1
PRKAR1B-203ENST00000403562 SHC4Q6S5L8 630 aa28.2■■■□□ 2.1
PRKAR1B-203ENST00000403562 DHX40Q8IX18 779 aaKnown RBP28.2■■■□□ 2.1
PRKAR1B-203ENST00000403562 EYA3Q99504 573 aa28.2■■■□□ 2.1
PRKAR1B-203ENST00000403562 BPIFA3Q9BQP9 254 aa28.2■■■□□ 2.1
PRKAR1B-203ENST00000403562 ZC3H12CQ9C0D7 883 aaKnown RBP28.2■■■□□ 2.1
PRKAR1B-203ENST00000403562 YBX3P16989 372 aaKnown RBP eCLIP28.18■■■□□ 2.11e-6■■■■□ 22.7
PRKAR1B-203ENST00000403562 FUT2Q10981 343 aa28.18■■■□□ 2.1
PRKAR1B-203ENST00000403562 KRI1Q8N9T8 703 aaKnown RBP28.18■■■□□ 2.1
PRKAR1B-203ENST00000403562 SUPT20HQ8NEM7 779 aa28.18■■■□□ 2.1
PRKAR1B-203ENST00000403562 ZNF277Q9NRM2 450 aaPredicted RBP28.18■■■□□ 2.1
PRKAR1B-203ENST00000403562 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.18■■■□□ 2.1
PRKAR1B-203ENST00000403562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.18■■■□□ 2.1
PRKAR1B-203ENST00000403562 AOC3Q16853 763 aa28.18■■■□□ 2.1
PRKAR1B-203ENST00000403562 DRC7Q8IY82 874 aa28.17■■■□□ 2.1
PRKAR1B-203ENST00000403562 ERCC4Q92889 916 aaPredicted RBP28.17■■■□□ 2.1
PRKAR1B-203ENST00000403562 MRFAP1L1Q96HT8 127 aa28.17■■■□□ 2.1
PRKAR1B-203ENST00000403562 TAOK3Q9H2K8 898 aa28.17■■■□□ 2.1
PRKAR1B-203ENST00000403562 KCNF1Q9H3M0 494 aa28.17■■■□□ 2.1
PRKAR1B-203ENST00000403562 CD209Q9NNX6 404 aa28.17■■■□□ 2.1
PRKAR1B-203ENST00000403562 JAG2Q9Y219 1238 aa28.17■■■□□ 2.1
PRKAR1B-203ENST00000403562 TOB1P50616 345 aaPredicted RBP28.16■■■□□ 2.1
PRKAR1B-203ENST00000403562 NLRP12P59046 1061 aa28.16■■■□□ 2.1
PRKAR1B-203ENST00000403562 TPM2P07951 284 aa28.16■■■□□ 2.1
PRKAR1B-203ENST00000403562 NOLC1Q14978 699 aaKnown RBP eCLIP28.16■■■□□ 2.1
PRKAR1B-203ENST00000403562 DOK7Q18PE1 504 aa28.16■■■□□ 2.1
PRKAR1B-203ENST00000403562 MCM9Q9NXL9 1143 aa28.16■■■□□ 2.1
PRKAR1B-203ENST00000403562 CEP131Q9UPN4 1083 aa28.16■■■□□ 2.1
PRKAR1B-203ENST00000403562 DDX60LQ5H9U9 1706 aaKnown RBP28.15■■■□□ 2.1
PRKAR1B-203ENST00000403562 ROBO3Q96MS0 1386 aa28.15■■■□□ 2.1
PRKAR1B-203ENST00000403562 PKN1Q16512 942 aa28.15■■■□□ 2.1
PRKAR1B-203ENST00000403562 TMTC3Q6ZXV5 915 aa28.15■■■□□ 2.1
PRKAR1B-203ENST00000403562 CTCFLQ8NI51 663 aaPredicted RBP28.15■■■□□ 2.1
PRKAR1B-203ENST00000403562 SPTLC3Q9NUV7 552 aa28.15■■■□□ 2.1
PRKAR1B-203ENST00000403562 COL4A5P29400 1685 aa28.15■■■□□ 2.1
PRKAR1B-203ENST00000403562 FOCADQ5VW36 1801 aa28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 PPIP5K2O43314 1243 aa28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 BAG3O95817 575 aa28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 LDHCP07864 332 aa28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 RASSF7Q02833 373 aa28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 CERS3Q8IU89 383 aa28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 AOPEPQ8N6M6 819 aa28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 NOL10Q9BSC4 688 aaKnown RBP28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 MKRN1Q9UHC7 482 aaKnown RBP28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 MORC2Q9Y6X9 1032 aaPredicted RBP28.14■■■□□ 2.1
PRKAR1B-203ENST00000403562 CYP2D6P10635 497 aa28.14■■■□□ 2.09
PRKAR1B-203ENST00000403562 IL1R1P14778 569 aa28.14■■■□□ 2.09
PRKAR1B-203ENST00000403562 PPP4CP60510 307 aa28.14■■■□□ 2.09
PRKAR1B-203ENST00000403562 NR5A1Q13285 461 aa28.14■■■□□ 2.09
PRKAR1B-203ENST00000403562 DPCR1Q3MIW9 517 aa28.14■■■□□ 2.09
PRKAR1B-203ENST00000403562 CLIC6Q96NY7 704 aa28.14■■■□□ 2.09
PRKAR1B-203ENST00000403562 PHF20Q9BVI0 1012 aa28.14■■■□□ 2.09
PRKAR1B-203ENST00000403562 COA1Q9GZY4 146 aa28.14■■■□□ 2.09
PRKAR1B-203ENST00000403562 DBNDD1Q9H9R9 158 aa28.14■■■□□ 2.09
PRKAR1B-203ENST00000403562 CLIP2Q9UDT6 1046 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms