RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 MYH1P12882 1939 aa15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 GOLGB1Q14789 3259 aaKnown RBP15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 DDX60LQ5H9U9 1706 aaKnown RBP15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 DDTLA6NHG4 134 aaPredicted RBP15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 UBE2Q2LH0YL09 131 aa15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 GADD45BO75293 160 aaPredicted RBP15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 MBD3O95983 291 aa15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 GUCY1A2P33402 732 aa15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 NOVP48745 357 aa15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 TNIP1Q15025 636 aa15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 KRT40Q6A162 431 aa15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 TMTC3Q6ZXV5 915 aa15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 SH3BP5LQ7L8J4 393 aa15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 FOXP4Q8IVH2 680 aaPredicted RBP15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 SCAND2PQ9GZW5 306 aaPredicted RBP15.44■□□□□ 0.06
CEACAM1-206ENST00000403136 PRPF3O43395 683 aaKnown RBP15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 PLEKHA8P1O95397 391 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 KIF5BP33176 963 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 SHMT1P34896 483 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 AKAP17AQ02040 695 aaKnown RBP15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 TRIM29Q14134 588 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 ATL3Q6DD88 541 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 MTMR14Q8NCE2 650 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 CEP95Q96GE4 821 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 CFAP45Q9UL16 551 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 TAOK2Q9UL54 1235 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 ADAMTSL1Q8N6G6 1762 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 FOCADQ5VW36 1801 aa15.43■□□□□ 0.06
CEACAM1-206ENST00000403136 AKR1B1P15121 316 aa15.42■□□□□ 0.06
CEACAM1-206ENST00000403136 ZSCAN29Q8IWY8 852 aaPredicted RBP15.42■□□□□ 0.06
CEACAM1-206ENST00000403136 SRBD1Q8N5C6 995 aaKnown RBP15.42■□□□□ 0.06
CEACAM1-206ENST00000403136 TMOD2Q9NZR1 351 aa15.42■□□□□ 0.06
CEACAM1-206ENST00000403136 V9GY48 417 aaPredicted RBP15.42■□□□□ 0.06
CEACAM1-206ENST00000403136 BRCA1P38398 1863 aaKnown RBP15.42■□□□□ 0.06
CEACAM1-206ENST00000403136 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
CEACAM1-206ENST00000403136 TOP1P11387 765 aaKnown RBP15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 UBE2HP62256 183 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 KIF23Q02241 960 aaPredicted RBP15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 GRM4Q14833 912 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 BRAPQ7Z569 592 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 CCDC17Q96LX7 622 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 ZNF396Q96N95 335 aaPredicted RBP15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 MTMR4Q9NYA4 1195 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 ZNF70Q9UC06 446 aaPredicted RBP15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 TCHHQ07283 1943 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 IGKV6D-41A0A0C4DH26 115 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 GNAQP50148 359 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 MMP14P50281 582 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 RASSF7Q02833 373 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 PKN1Q16512 942 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 METTL16Q86W50 562 aaKnown RBP15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 LEO1Q8WVC0 666 aaPredicted RBP15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 SPATA32Q96LK8 384 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 ELP1O95163 1332 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 PSME4Q14997 1843 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 PLIN4Q96Q06 1357 aa15.41■□□□□ 0.06
CEACAM1-206ENST00000403136 SLURP2P0DP57 97 aa15.4■□□□□ 0.06
CEACAM1-206ENST00000403136 PRELPP51888 382 aa15.4■□□□□ 0.06
CEACAM1-206ENST00000403136 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
CEACAM1-206ENST00000403136 DNAJC18Q9H819 358 aa15.4■□□□□ 0.06
CEACAM1-206ENST00000403136 MAD2L2Q9UI95 211 aa15.4■□□□□ 0.06
CEACAM1-206ENST00000403136 CLRN2A0PK11 232 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 KIF28PB7ZC32 967 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 TCP10L2B9ZVM9 353 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 FZD9O00144 591 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 RPS12P25398 132 aaKnown RBP15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 FKBP1CQ5VVH2 108 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 CAVIN1Q6NZI2 390 aaKnown RBP15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 TATDN1Q6P1N9 297 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 STAG2Q8N3U4 1231 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 FAM151AQ8WW52 585 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 ZBED3Q96IU2 234 aaPredicted RBP15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 TRIM34Q9BYJ4 488 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 RCOR1Q9UKL0 485 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 ATRNL1Q5VV63 1379 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 PALM3A6NDB9 673 aaPredicted RBP15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 U2AF2P26368 475 aaKnown RBP eCLIP15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 EIF6P56537 245 aaKnown RBP15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 SAFBQ15424 915 aaKnown RBP eCLIP15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 CERKLQ49MI3 558 aaPredicted RBP15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 CNTNAP5Q8WYK1 1306 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 USP28Q96RU2 1077 aa15.39■□□□□ 0.05
CEACAM1-206ENST00000403136 hCG_1642624A0A1W2PR95 340 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 MPHOSPH10O00566 681 aaKnown RBP15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 TTLL1O95922 423 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 MMP1P03956 469 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 XBP1P17861 261 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 ZNF280AP59817 542 aaPredicted RBP15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 MYSM1Q5VVJ2 828 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 LZTS2Q9BRK4 669 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 MYOZ2Q9NPC6 264 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 CLIP2Q9UDT6 1046 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 KCNJ14Q9UNX9 436 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 MTMR7Q9Y216 660 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 ECM29Q5VYK3 1845 aa15.38■□□□□ 0.05
CEACAM1-206ENST00000403136 FAM196BA6NMK8 535 aa15.37■□□□□ 0.05
CEACAM1-206ENST00000403136 WNT10BO00744 389 aa15.37■□□□□ 0.05
CEACAM1-206ENST00000403136 MYO1BO43795 1136 aa15.37■□□□□ 0.05
CEACAM1-206ENST00000403136 CEBPZQ03701 1054 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms