RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 TSPY3P0CV98 308 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 TSPY8P0CW00 308 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 C2orf54Q08AI8 447 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 SFMBT2Q5VUG0 894 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 KLHL29Q96CT2 875 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 PSMD1Q99460 953 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 CRNKL1Q9BZJ0 848 aaKnown RBP10.86□□□□□ -0.67
HERC3-202ENST00000402738 MORC3Q14149 939 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 TTC38Q5R3I4 469 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 FAM212AQ96EL1 285 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 CXorf56Q9H5V9 222 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 SOWAHDA6NJG2 315 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 TNNI2P48788 182 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 PDCLQ13371 301 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 NCAPH2Q6IBW4 605 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 HS2ST1Q7LGA3 356 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 MIGA1Q8NAN2 632 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 CLIC6Q96NY7 704 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 DBNDD2Q9BQY9 259 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 NUF2Q9BZD4 464 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 VCX3AQ9NNX9 186 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 CLIC4Q9Y696 253 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 SUN1O94901 812 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 PPP4R3AQ6IN85 833 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 ACRBPQ8NEB7 543 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 CCDC97Q96F63 343 aaPredicted RBP10.85□□□□□ -0.67
HERC3-202ENST00000402738 KRT12Q99456 494 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 INTS9Q9NV88 658 aaKnown RBP10.85□□□□□ -0.67
HERC3-202ENST00000402738 LARSQ9P2J5 1176 aaKnown RBP10.85□□□□□ -0.67
HERC3-202ENST00000402738 TXNDC16Q9P2K2 825 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 RBL2Q08999 1139 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 LETM2Q2VYF4 491 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 PPIP5K1Q6PFW1 1433 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 CFAP61Q8NHU2 1237 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 MORC4Q8TE76 937 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 FERMT1Q9BQL6 677 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 CTTNBP2NLQ9P2B4 639 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 ABCC4O15439 1325 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 TROVE2P10155 538 aaKnown RBP eCLIP10.85□□□□□ -0.67
HERC3-202ENST00000402738 ADCK5Q3MIX3 580 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 TTC16Q8NEE8 873 aa10.85□□□□□ -0.67
HERC3-202ENST00000402738 ARHGAP42A6NI28 874 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 SNRPA1P09661 255 aaKnown RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 CCDC84Q86UT8 332 aaPredicted RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 TRMT2AQ8IZ69 625 aaKnown RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 FTOQ9C0B1 505 aaKnown RBP eCLIP10.84□□□□□ -0.67
HERC3-202ENST00000402738 EPB41L5Q9HCM4 733 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 PPP1R9AQ9ULJ8 1098 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 PCDHA5Q9Y5H7 936 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 CD2APQ9Y5K6 639 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 V9GY48 417 aaPredicted RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 CTNND1O60716 968 aaKnown RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 NR1D1P20393 614 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 TIMM10P62072 90 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 SPATA1Q5VX52 437 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 TBC1D1Q86TI0 1168 aaPredicted RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 SYCE1Q8N0S2 351 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 TSPYL2Q9H2G4 693 aaPredicted RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 SCOCQ9UIL1 159 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.84□□□□□ -0.67
HERC3-202ENST00000402738 PDE6BP35913 854 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 SLC39A6Q13433 755 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 CCDC144BQ3MJ40 725 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 MAGEB6Q8N7X4 407 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 TMEM87BQ96K49 555 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
HERC3-202ENST00000402738 FAM13AO94988 1023 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 HEXIM1O94992 359 aaKnown RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 RPL13P26373 211 aaKnown RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 PLS1Q14651 629 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 TNNI3KQ59H18 835 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 MIER3Q7Z3K6 550 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 CCDC65Q8IXS2 484 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 PRDM11Q9NQV5 511 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.84□□□□□ -0.67
HERC3-202ENST00000402738 ANKIB1Q9P2G1 1089 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 MYO1AQ9UBC5 1043 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 HDAC9Q9UKV0 1011 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 FPGT-TNNI3KV9GXZ4 949 aa10.84□□□□□ -0.67
HERC3-202ENST00000402738 E7EWF7 191 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 I3L4J1 428 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 COBLO75128 1261 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 FLOT1O75955 427 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 ADAT2Q7Z6V5 191 aaKnown RBP10.83□□□□□ -0.68
HERC3-202ENST00000402738 ANKRD7Q92527 254 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 RILPQ96NA2 401 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 TMOD3Q9NYL9 352 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 IKBKBO14920 756 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 ARL1P40616 181 aaPredicted RBP10.83□□□□□ -0.68
HERC3-202ENST00000402738 CCDC13Q8IYE1 715 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 EDC3Q96F86 508 aaKnown RBP10.83□□□□□ -0.68
HERC3-202ENST00000402738 IRAK4Q9NWZ3 460 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 RIMS2Q9UQ26 1411 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 A0A0D9SFI3 127 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 CCDC169A6NNP5 214 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 PFKFB2O60825 505 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 TBC1D8O95759 1140 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 EPB41P11171 864 aaKnown RBP10.83□□□□□ -0.68
HERC3-202ENST00000402738 USP37Q86T82 979 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 VSTM4Q8IW00 320 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms