RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 DGKZQ13574 1117 aa22.9■■□□□ 1.26
RTN4-207ENST00000402434 C17orf99Q6UX52 265 aa22.9■■□□□ 1.26
RTN4-207ENST00000402434 TNS4Q8IZW8 715 aa22.9■■□□□ 1.26
RTN4-207ENST00000402434 ZNF287Q9HBT7 754 aa22.9■■□□□ 1.26
RTN4-207ENST00000402434 EMILIN3Q9NT22 766 aa22.9■■□□□ 1.26
RTN4-207ENST00000402434 TMOD4Q9NZQ9 345 aa22.9■■□□□ 1.26
RTN4-207ENST00000402434 ZMYM6O95789 1325 aa22.89■■□□□ 1.25
RTN4-207ENST00000402434 FGAP02671 866 aa22.89■■□□□ 1.25
RTN4-207ENST00000402434 CYP2C8P10632 490 aa22.89■■□□□ 1.25
RTN4-207ENST00000402434 ERICH6BQ5W0A0 696 aa22.89■■□□□ 1.25
RTN4-207ENST00000402434 SIAH1Q8IUQ4 282 aa22.89■■□□□ 1.25
RTN4-207ENST00000402434 ACER1Q8TDN7 264 aa22.89■■□□□ 1.25
RTN4-207ENST00000402434 C12orf42Q96LP6 360 aa22.89■■□□□ 1.25
RTN4-207ENST00000402434 MKNK2Q9HBH9 465 aa22.89■■□□□ 1.25
RTN4-207ENST00000402434 HOXA7P31268 230 aaPredicted RBP22.88■■□□□ 1.25
RTN4-207ENST00000402434 USP17L2Q6R6M4 530 aa22.88■■□□□ 1.25
RTN4-207ENST00000402434 CTU1Q7Z7A3 348 aaKnown RBP22.88■■□□□ 1.25
RTN4-207ENST00000402434 ANAPC4Q9UJX5 808 aa22.88■■□□□ 1.25
RTN4-207ENST00000402434 USP14P54578 494 aa22.87■■□□□ 1.25
RTN4-207ENST00000402434 PABPC4Q13310 644 aaKnown RBP eCLIP22.87■■□□□ 1.253e-7■■■□□ 18.3
RTN4-207ENST00000402434 FEZ1Q99689 392 aa22.87■■□□□ 1.25
RTN4-207ENST00000402434 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.87■■□□□ 1.25
RTN4-207ENST00000402434 KANSL2Q9H9L4 492 aa22.87■■□□□ 1.25
RTN4-207ENST00000402434 PNMA3Q9UL41 463 aa22.87■■□□□ 1.25
RTN4-207ENST00000402434 A0A1W2PRG0 241 aa22.86■■□□□ 1.25
RTN4-207ENST00000402434 SLC3A2P08195 630 aaKnown RBP22.86■■□□□ 1.25
RTN4-207ENST00000402434 PDE4BQ07343 736 aa22.86■■□□□ 1.25
RTN4-207ENST00000402434 STK11IPQ8N1F8 1099 aa22.86■■□□□ 1.25
RTN4-207ENST00000402434 ERO1AQ96HE7 468 aa22.86■■□□□ 1.25
RTN4-207ENST00000402434 CPA4Q9UI42 421 aa22.86■■□□□ 1.25
RTN4-207ENST00000402434 BCRP11274 1271 aa22.85■■□□□ 1.25
RTN4-207ENST00000402434 CHMLP26374 656 aa22.85■■□□□ 1.25
RTN4-207ENST00000402434 ZNF444Q8N0Y2 327 aaPredicted RBP22.85■■□□□ 1.25
RTN4-207ENST00000402434 ASCC2Q9H1I8 757 aaPredicted RBP22.85■■□□□ 1.25
RTN4-207ENST00000402434 ICA1Q05084 483 aa22.85■■□□□ 1.25
RTN4-207ENST00000402434 SKAP1Q86WV1 359 aa22.85■■□□□ 1.25
RTN4-207ENST00000402434 CLEC10AQ8IUN9 316 aa22.85■■□□□ 1.25
RTN4-207ENST00000402434 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.85■■□□□ 1.255e-6■□□□□ 9.7
RTN4-207ENST00000402434 TMX2Q9Y320 296 aa22.85■■□□□ 1.25
RTN4-207ENST00000402434 PRDM1O75626 825 aa22.84■■□□□ 1.25
RTN4-207ENST00000402434 FGRP09769 529 aa22.84■■□□□ 1.25
RTN4-207ENST00000402434 OSBPP22059 807 aa22.84■■□□□ 1.25
RTN4-207ENST00000402434 ZYXQ15942 572 aaKnown RBP22.84■■□□□ 1.25
RTN4-207ENST00000402434 CD99L2Q8TCZ2 262 aa22.84■■□□□ 1.25
RTN4-207ENST00000402434 SMCR8Q8TEV9 937 aaPredicted RBP22.84■■□□□ 1.25
RTN4-207ENST00000402434 MCOLN1Q9GZU1 580 aa22.84■■□□□ 1.25
RTN4-207ENST00000402434 IL25Q9H293 177 aa22.84■■□□□ 1.25
RTN4-207ENST00000402434 ARHGEF10LQ9HCE6 1279 aa22.84■■□□□ 1.25
RTN4-207ENST00000402434 GREB1LQ9C091 1923 aaPredicted RBP22.83■■□□□ 1.25
RTN4-207ENST00000402434 IGKV6D-41A0A0C4DH26 115 aa22.83■■□□□ 1.25
RTN4-207ENST00000402434 CAP1Q01518 475 aa22.83■■□□□ 1.25
RTN4-207ENST00000402434 CTDSPL2Q05D32 466 aa22.83■■□□□ 1.25
RTN4-207ENST00000402434 PKN2Q16513 984 aaKnown RBP22.83■■□□□ 1.25
RTN4-207ENST00000402434 DSCC1Q9BVC3 393 aa22.83■■□□□ 1.25
RTN4-207ENST00000402434 RAD50Q92878 1312 aa22.82■■□□□ 1.24
RTN4-207ENST00000402434 EEF2P13639 858 aaKnown RBP22.82■■□□□ 1.24
RTN4-207ENST00000402434 VCAM1P19320 739 aa22.82■■□□□ 1.24
RTN4-207ENST00000402434 LACTBP83111 547 aaPredicted RBP22.82■■□□□ 1.24
RTN4-207ENST00000402434 RUFY2Q8WXA3 655 aa22.82■■□□□ 1.24
RTN4-207ENST00000402434 TACC3Q9Y6A5 838 aa22.82■■□□□ 1.24
RTN4-207ENST00000402434 GCLCP48506 637 aaPredicted RBP22.81■■□□□ 1.24
RTN4-207ENST00000402434 IRX3P78415 501 aaPredicted RBP22.81■■□□□ 1.24
RTN4-207ENST00000402434 BMP2KLQ5H9B9 411 aa22.81■■□□□ 1.24
RTN4-207ENST00000402434 OTOP1Q7RTM1 612 aa22.81■■□□□ 1.24
RTN4-207ENST00000402434 NEDD1Q8NHV4 660 aa22.81■■□□□ 1.24
RTN4-207ENST00000402434 SH2D4AQ9H788 454 aa22.81■■□□□ 1.24
RTN4-207ENST00000402434 PPP4R2Q9NY27 417 aa22.81■■□□□ 1.24
RTN4-207ENST00000402434 PLIN4Q96Q06 1357 aa22.8■■□□□ 1.24
RTN4-207ENST00000402434 ORC4O43929 436 aa22.8■■□□□ 1.24
RTN4-207ENST00000402434 ARHGEF6Q15052 776 aa22.8■■□□□ 1.24
RTN4-207ENST00000402434 LPAR1Q92633 364 aa22.8■■□□□ 1.24
RTN4-207ENST00000402434 P2RX7Q99572 595 aaKnown RBP22.8■■□□□ 1.24
RTN4-207ENST00000402434 INCENPQ9NQS7 918 aa22.8■■□□□ 1.24
RTN4-207ENST00000402434 NYAP2Q9P242 653 aa22.8■■□□□ 1.24
RTN4-207ENST00000402434 USP17L15C9J2P7 530 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 USP17L13C9JLJ4 530 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 USP17L11C9JVI0 530 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 USP17L18D6R9N7 530 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 USP17L22D6RA61 530 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 USP17L17D6RBQ6 530 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 USP17L19D6RCP7 530 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 USP17L20D6RJB6 530 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 USP17L24Q0WX57 530 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 KIAA1755Q5JYT7 1200 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 CATSPERGQ6ZRH7 1159 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 VCPKMTQ9H867 229 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 EFCC1Q9HA90 598 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 TRIM17Q9Y577 477 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 TSPY3P0CV98 308 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 TSPY8P0CW00 308 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 HERVK_113P62684 666 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 TFAP4Q01664 338 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 KIF22Q14807 665 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 FAM110CQ1W6H9 321 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 ARHGAP39Q9C0H5 1083 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 NBPF3Q9H094 633 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 MTMR4Q9NYA4 1195 aa22.79■■□□□ 1.24
RTN4-207ENST00000402434 SGSM2O43147 1006 aa22.78■■□□□ 1.24
RTN4-207ENST00000402434 GNRH1P01148 92 aa22.78■■□□□ 1.24
RTN4-207ENST00000402434 PCP11498 1178 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms