RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 TMEM40Q8WWA1 233 aa3.71□□□□□ -1.82
CBX3P9-201ENST00000402326 TBC1D32Q96NH3 1257 aa3.71□□□□□ -1.82
CBX3P9-201ENST00000402326 PIF1Q9H611 641 aa3.71□□□□□ -1.82
CBX3P9-201ENST00000402326 C1GALT1Q9NS00 363 aa3.71□□□□□ -1.82
CBX3P9-201ENST00000402326 KLHL3Q9UH77 587 aa3.71□□□□□ -1.82
CBX3P9-201ENST00000402326 MEIS3P2A8K0S8 358 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 GSC2O15499 205 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 DNAJA2O60884 412 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 RAG1P15918 1043 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 GIPRP48546 466 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 NFIAQ12857 509 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 CDK5R2Q13319 367 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 LRP8Q14114 963 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 RSPO4Q2I0M5 234 aaPredicted RBP3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 ARSHQ5FYA8 562 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 CDCP2Q5VXM1 449 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 INTS3Q68E01 1043 aaKnown RBP3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 OVOS1Q6IE37 1185 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 NLRC3Q7RTR2 1065 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 ZAR1Q86SH2 424 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 SLC51AQ86UW1 340 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 SLFN12Q8IYM2 578 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 PHACTR4Q8IZ21 702 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 ARMC5Q96C12 935 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 ATG4CQ96DT6 458 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 SHDQ96IW2 340 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 CCDC74BQ96LY2 380 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 MFSD14AQ96MC6 490 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 TM9SF2Q99805 663 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 DPH2Q9BQC3 489 aaPredicted RBP3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 ANTXR1Q9H6X2 564 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 CNNM2Q9H8M5 875 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 ZNF408Q9H9D4 720 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 PRDM10Q9NQV6 1147 aa3.7□□□□□ -1.82
CBX3P9-201ENST00000402326 IGLV1-40P01703 118 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 NME1P15531 152 aaKnown RBP3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 FSTP19883 344 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 GBP1P32455 592 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 ADMP35318 185 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 CYP27A1Q02318 531 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 CYP27C1Q4G0S4 372 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 OGFOD3Q6PK18 319 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 LSRQ86X29 649 aaPredicted RBP3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 FBXL6Q8N531 539 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 TAB3Q8N5C8 712 aaPredicted RBP3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 TOP6BLQ8N6T0 577 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 XAGE3Q8WTP9 111 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 CYB5D2Q8WUJ1 264 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 ANAPC16Q96DE5 110 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 MIPEPQ99797 713 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 DBNDD2Q9BQY9 259 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 DUSP23Q9BVJ7 150 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 HIRIP3Q9BW71 556 aaPredicted RBP3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 ZSWIM4Q9H7M6 989 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 RNF114Q9Y508 228 aa3.69□□□□□ -1.82
CBX3P9-201ENST00000402326 TNFRSF10CO14798 259 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 RGS13O14921 159 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 DYRK3O43781 588 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 SLITRK5O94991 958 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 FAM87AP0C7U9 286 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 CYP7A1P22680 504 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 GUCY2CP25092 1073 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 CCNFP41002 786 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 CHMP4BP1P59074 171 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 BMS1Q14692 1282 aaKnown RBP3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 DUSP27Q5VZP5 1158 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 ZNF746Q6NUN9 644 aaPredicted RBP3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 LETMD1Q6P1Q0 360 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 ANKS3Q6ZW76 656 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 HNRNPLLQ8WVV9 542 aaKnown RBP3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 GATA6Q92908 595 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 KIF2CQ99661 725 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 METTL22Q9BUU2 404 aaPredicted RBP3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 OSBPL2Q9H1P3 480 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 ATG3Q9NT62 314 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 CEP131Q9UPN4 1083 aa3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 R3HCC1Q9Y3T6 440 aaKnown RBP3.68□□□□□ -1.82
CBX3P9-201ENST00000402326 FAM170BA6NMN3 283 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 WDR64B1ANS9 1081 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 LEFTY1O75610 366 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 EOMESO95936 686 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 F13BP05160 661 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 ETV3P41162 512 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 CASP7P55210 303 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 PPP2R5EQ16537 467 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 CPSF6Q16630 551 aaKnown RBP eCLIP3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 TNNI3KQ59H18 835 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 RUFY4Q6ZNE9 571 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 ZNF765Q7L2R6 523 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 CDH24Q86UP0 819 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 CKAP2LQ8IYA6 745 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 SHISA5Q8N114 240 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 FAM169BQ8N8A8 192 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 C19orf47Q8N9M1 422 aaKnown RBP3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 RIN3Q8TB24 985 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 SHKBP1Q8TBC3 707 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 BAHD1Q8TBE0 780 aaPredicted RBP3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 PPP1R13LQ8WUF5 828 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 COX4I2Q96KJ9 171 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 SLC9A7Q96T83 725 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms