RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 GINM1Q9NU53 330 aa14.57□□□□□ -0.08
LINC00544-201ENST00000400540 ZNFX1Q9P2E3 1918 aaKnown RBP14.56□□□□□ -0.08
LINC00544-201ENST00000400540 BMP8BP34820 402 aa14.56□□□□□ -0.08
LINC00544-201ENST00000400540 RGS2P41220 211 aa14.56□□□□□ -0.08
LINC00544-201ENST00000400540 USP5P45974 858 aa14.56□□□□□ -0.08
LINC00544-201ENST00000400540 LHX8Q68G74 356 aa14.56□□□□□ -0.08
LINC00544-201ENST00000400540 TATDN1Q6P1N9 297 aa14.56□□□□□ -0.08
LINC00544-201ENST00000400540 PLEKHH3Q7Z736 793 aa14.56□□□□□ -0.08
LINC00544-201ENST00000400540 FEZ1Q99689 392 aa14.56□□□□□ -0.08
LINC00544-201ENST00000400540 NOP58Q9Y2X3 529 aaKnown RBP14.56□□□□□ -0.08
LINC00544-201ENST00000400540 COL6A1P12109 1028 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 EVX2Q03828 476 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 RAB3GAP1Q15042 981 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 Q7L0L9 218 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 ITPRIPQ8IWB1 547 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 CCAR1Q8IX12 1150 aaKnown RBP14.55□□□□□ -0.08
LINC00544-201ENST00000400540 ACER1Q8TDN7 264 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 C12orf42Q96LP6 360 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 APBA2Q99767 749 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 FLRT1Q9NZU1 646 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 SERPINB13Q9UIV8 391 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 PLXNA1Q9UIW2 1896 aa14.55□□□□□ -0.08
LINC00544-201ENST00000400540 VCAM1P19320 739 aa14.54□□□□□ -0.08
LINC00544-201ENST00000400540 LRRC26Q2I0M4 334 aa14.54□□□□□ -0.08
LINC00544-201ENST00000400540 FTSJ3Q8IY81 847 aaKnown RBP14.54□□□□□ -0.08
LINC00544-201ENST00000400540 SLC17A8Q8NDX2 589 aa14.54□□□□□ -0.08
LINC00544-201ENST00000400540 GTF3C2Q8WUA4 911 aaPredicted RBP14.54□□□□□ -0.08
LINC00544-201ENST00000400540 EXOC6BQ9Y2D4 811 aa14.54□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L15C9J2P7 530 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L13C9JLJ4 530 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L11C9JVI0 530 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L18D6R9N7 530 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L22D6RA61 530 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L17D6RBQ6 530 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L19D6RCP7 530 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L20D6RJB6 530 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 GUCY1A2P33402 732 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 SHMT1P34896 483 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 PLCD1P51178 756 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L24Q0WX57 530 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 MAP2K5Q13163 448 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 ABCB5Q2M3G0 1257 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 CERKLQ49MI3 558 aaPredicted RBP14.53□□□□□ -0.08
LINC00544-201ENST00000400540 WDR78Q5VTH9 848 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 CATSPERGQ6ZRH7 1159 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 TRMT44Q8IYL2 757 aaKnown RBP14.53□□□□□ -0.08
LINC00544-201ENST00000400540 EHD4Q9H223 541 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 CWC22Q9HCG8 908 aaKnown RBP14.53□□□□□ -0.08
LINC00544-201ENST00000400540 BTBD7Q9P203 1132 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 RABGAP1Q9Y3P9 1069 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 CDH23Q9H251 3354 aa14.53□□□□□ -0.08
LINC00544-201ENST00000400540 IGSF3O75054 1194 aa14.52□□□□□ -0.09
LINC00544-201ENST00000400540 CEP85Q6P2H3 762 aa14.52□□□□□ -0.09
LINC00544-201ENST00000400540 TDHQ8IZJ6 230 aa14.52□□□□□ -0.09
LINC00544-201ENST00000400540 RIOK1Q9BRS2 568 aaKnown RBP14.52□□□□□ -0.09
LINC00544-201ENST00000400540 UBE2OQ9C0C9 1292 aaKnown RBP14.52□□□□□ -0.09
LINC00544-201ENST00000400540 SPDYE16A6NNV3 312 aaPredicted RBP14.51□□□□□ -0.09
LINC00544-201ENST00000400540 MDM2Q00987 491 aaPredicted RBP14.51□□□□□ -0.09
LINC00544-201ENST00000400540 MAP3K12Q12852 859 aa14.51□□□□□ -0.09
LINC00544-201ENST00000400540 LRIT3Q3SXY7 679 aa14.51□□□□□ -0.09
LINC00544-201ENST00000400540 AACSQ86V21 672 aa14.51□□□□□ -0.09
LINC00544-201ENST00000400540 DEFB123Q8N688 67 aa14.51□□□□□ -0.09
LINC00544-201ENST00000400540 NPLOC4Q8TAT6 608 aa14.51□□□□□ -0.09
LINC00544-201ENST00000400540 EDC3Q96F86 508 aaKnown RBP14.51□□□□□ -0.09
LINC00544-201ENST00000400540 KIAA1683Q9H0B3 1180 aa14.51□□□□□ -0.09
LINC00544-201ENST00000400540 RPAP3Q9H6T3 665 aaPredicted RBP14.51□□□□□ -0.09
LINC00544-201ENST00000400540 DLL1O00548 723 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 PTPREP23469 700 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 USP14P54578 494 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 CCNA1P78396 465 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 GRB14Q14449 540 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 SEPT2Q15019 361 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 TTC6Q86TZ1 520 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 CERS3Q8IU89 383 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 TRPV1Q8NER1 839 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 IL1RAPL2Q9NP60 686 aa14.5□□□□□ -0.09
LINC00544-201ENST00000400540 MAGEB6P1A0A0J9YX57 407 aa14.49□□□□□ -0.09
LINC00544-201ENST00000400540 A0A1W2PRG0 241 aa14.49□□□□□ -0.09
LINC00544-201ENST00000400540 SLC15A5A6NIM6 579 aa14.49□□□□□ -0.09
LINC00544-201ENST00000400540 CYP2C19P33261 490 aa14.49□□□□□ -0.09
LINC00544-201ENST00000400540 GABPAQ06546 454 aa14.49□□□□□ -0.09
LINC00544-201ENST00000400540 LBX2Q6XYB7 198 aa14.49□□□□□ -0.09
LINC00544-201ENST00000400540 CABP5Q9NP86 173 aa14.49□□□□□ -0.09
LINC00544-201ENST00000400540 VCANP13611 3396 aa14.49□□□□□ -0.09
LINC00544-201ENST00000400540 SMCHD1A6NHR9 2005 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 GLRX3O76003 335 aaKnown RBP14.48□□□□□ -0.09
LINC00544-201ENST00000400540 POLR3DP05423 398 aaPredicted RBP14.48□□□□□ -0.09
LINC00544-201ENST00000400540 CYP2D6P10635 497 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 PDE6AP16499 860 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 CNGA1P29973 690 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 HNRNPUQ00839 825 aaKnown RBP eCLIP14.48□□□□□ -0.09
LINC00544-201ENST00000400540 KIAA1755Q5JYT7 1200 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 MFSD14CQ5VZR4 134 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 GPR153Q6NV75 609 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 SLC44A5Q8NCS7 719 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 PANK1Q8TE04 598 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 SDR42E1Q8WUS8 393 aa14.48□□□□□ -0.09
LINC00544-201ENST00000400540 SENP6Q9GZR1 1112 aaPredicted RBP14.48□□□□□ -0.09
LINC00544-201ENST00000400540 DDX20Q9UHI6 824 aaKnown RBP14.48□□□□□ -0.09
LINC00544-201ENST00000400540 IVNS1ABPQ9Y6Y0 642 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms