RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 KIF17Q9P2E2 1029 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 SNX5Q9Y5X3 404 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 HSPA1AP0DMV8 641 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 HSPA1BP0DMV9 641 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 GUCY1A3Q02108 690 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 TBC1D22AQ8WUA7 517 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 RGS16O15492 202 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 POLR3DP05423 398 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 SLC9A5Q14940 896 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 PARVGQ9HBI0 331 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 CAPN7Q9Y6W3 813 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 DYTNA2CJ06 578 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 CC2D2BQ6DHV5 1058 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 MPRIPQ6WCQ1 1025 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 HDAC11Q96DB2 347 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 EDEM3Q9BZQ6 932 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 EIF3CLB5ME19 914 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 EIF3CQ99613 913 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 PHF23Q9BUL5 403 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 BRD1O95696 1058 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 EFCAB2Q5VUJ9 269 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 CEP85Q6P2H3 762 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 FAM180AQ6UWF9 173 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 FBXL5Q9UKA1 691 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 FAM83GA6ND36 823 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 ELL2O00472 640 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 ZNF444Q8N0Y2 327 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 STK24Q9Y6E0 443 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 DEPDC1Q5TB30 811 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 LRRC8EQ6NSJ5 796 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 CSGALNACT2Q8N6G5 542 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 TMCC1O94876 653 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 CCDC85BQ15834 202 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 CAVIN4Q5BKX8 364 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 TEDDM1Q5T9Z0 273 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 BRD8Q9H0E9 1235 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 POTEIP0CG38 1075 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 SESN2P58004 480 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 PPP2R3AQ06190 1150 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 CAPRIN1Q14444 709 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 TINF2Q9BSI4 451 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 NDEL1Q9GZM8 345 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 C6orf50Q9HD87 102 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 SYT1P21579 422 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 NFKBIAP25963 317 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 RASSF7Q02833 373 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 CUL3Q13618 768 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 KCNG4Q8TDN1 519 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 FANCEQ9HB96 536 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 PSME1Q06323 249 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 NUTM2DQ5VT03 806 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 NUTM2AQ8IVF1 878 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 GRK7Q8WTQ7 553 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 SYBUQ9NX95 663 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 SMCO3A2RU48 225 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 GOLGA8TH3BQL2 631 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 GOLGA8HP0CJ92 632 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 PDE4BQ07343 736 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 CSRNP1Q96S65 589 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 ICE1Q9Y2F5 2266 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 ADCY3O60266 1144 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 SF3A3Q12874 501 aaKnown RBP eCLIP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 ZC3H18Q86VM9 953 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 SESTD1Q86VW0 696 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 ZKSCAN3Q9BRR0 538 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 MAN1A1P33908 653 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 GOLGA8IPA6NC78 632 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 ARHGAP6O43182 974 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 LPXNO60711 386 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 IQCB1Q15051 598 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 NCAPH2Q6IBW4 605 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 KRT77Q7Z794 578 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 SMC5Q8IY18 1101 aa9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 RIOK1Q9BRS2 568 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-220ENST00000399655 POTECB2RU33 542 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 RAD21L1Q9H4I0 556 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 RTEL1Q9NZ71 1219 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 CNTLNQ9NXG0 1405 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 TBC1D8O95759 1140 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 NBPF20Q3BBV1 942 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 KIF1BPQ96EK5 621 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 LCA5LO95447 670 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 ASAP2O43150 1006 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 OGFOD1Q8N543 542 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 SH3GL1Q99961 368 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 IRX5P78411 483 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 ECE1P42892 770 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 TTLL12Q14166 644 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 RNF169Q8NCN4 708 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 EXOC6Q8TAG9 804 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 SRGAP3O43295 1099 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 NRG3P56975 720 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 TBC1D23Q9NUY8 699 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 TK2O00142 265 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 SYKP43405 635 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 TMX1Q9H3N1 280 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 ATXN3P54252 364 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms