RNA–Protein interactions for RNA: ENST00000399591.5

CACNA1C-205, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-205ENST00000399591 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 NAP1L4Q99733 375 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 TRIM56Q9BRZ2 755 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 ACTN4O43707 911 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 TYRO3Q06418 890 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 PLCB4Q15147 1175 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 COPS6Q7L5N1 327 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 HAUS1Q96CS2 278 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 PSMA7O14818 248 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 GNGT1P63211 74 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 CSRNP2Q9H175 543 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 HMGB1P1B2RPK0 211 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 OCM2P0CE71 109 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 OCMP0CE72 109 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 AP5M1Q9H0R1 490 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 HELLSQ9NRZ9 838 aa12.38□□□□□ -0.43
CACNA1C-205ENST00000399591 ASIC1P78348 528 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 MAEAQ7L5Y9 396 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 NCOA7Q8NI08 942 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 CARD6Q9BX69 1037 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 EFCC1Q9HA90 598 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 SCINQ9Y6U3 715 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 HS1BP3Q53T59 392 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 MRPS27Q92552 414 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 TMPOP42166 694 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 GJC2Q5T442 439 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 TMCO5AQ8N6Q1 288 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 DHX58Q96C10 678 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 ZFYVE19Q96K21 471 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 KRT82Q9NSB4 513 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 SORBS3O60504 671 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 ANXA1P04083 346 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 ZFXP17010 805 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 HLA-DPA1P20036 260 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 EEF1DP29692 281 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 AKR1B15C9JRZ8 316 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 CLTAP09496 248 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 TROVE2P10155 538 aaKnown RBP eCLIP12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 STRN3Q13033 797 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 STX17P56962 302 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 FAM196AQ6ZSG2 479 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 MIGA1Q8NAN2 632 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 CEP19Q96LK0 163 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 HINFPQ9BQA5 517 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 SYTL2Q9HCH5 934 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 GPCPD1Q9NPB8 672 aa12.37□□□□□ -0.43
CACNA1C-205ENST00000399591 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 MARCKSP29966 332 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 ANKRD20A4Q4UJ75 823 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 ANKRD20A8PQ5CZ79 823 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 ANKRD20A2Q5SQ80 823 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 ANKRD20A1Q5TYW2 823 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 CDC26Q8NHZ8 85 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 KCNG4Q8TDN1 519 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 LBHD1Q9BQE6 289 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 RANBP1P43487 201 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 HIF1AQ16665 826 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 CAPN12Q6ZSI9 719 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 SRGAP1Q7Z6B7 1085 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 HAUS2Q9NVX0 235 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 DACT1Q9NYF0 836 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 FIS1Q9Y3D6 152 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 CAMSAP2Q08AD1 1489 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 GTPBP10A4D1E9 387 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 RNF40O75150 1001 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 NSMCE1Q8WV22 266 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 NBNO60934 754 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 PPFIA4O75335 1185 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 CCNA1P78396 465 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 UBE3AQ05086 875 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 RILPL1Q5EBL4 403 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 SDCCAG3Q96C92 435 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 RBSNQ9H1K0 784 aa12.36□□□□□ -0.43
CACNA1C-205ENST00000399591 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-205ENST00000399591 RAD50Q92878 1312 aa12.35□□□□□ -0.43
CACNA1C-205ENST00000399591 CFAP61Q8NHU2 1237 aa12.35□□□□□ -0.43
CACNA1C-205ENST00000399591 CNKSR1Q969H4 720 aa12.35□□□□□ -0.43
CACNA1C-205ENST00000399591 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
CACNA1C-205ENST00000399591 CCDC169A6NNP5 214 aa12.35□□□□□ -0.43
CACNA1C-205ENST00000399591 GSTA1P08263 222 aa12.35□□□□□ -0.43
CACNA1C-205ENST00000399591 GSTA2P09210 222 aa12.35□□□□□ -0.43
CACNA1C-205ENST00000399591 GRAMD4Q6IC98 578 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms