RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 USP17L17D6RBQ6 530 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 USP17L19D6RCP7 530 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 USP17L20D6RJB6 530 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 BAG3O95817 575 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 CYBAP13498 195 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 CYP2C19P33261 490 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 USP17L24Q0WX57 530 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 GJC2Q5T442 439 aaPredicted RBP22.22■■□□□ 1.15
UFD1-202ENST00000399523 MAPKAPK5Q8IW41 473 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 TGFBRAP1Q8WUH2 860 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 AATFQ9NY61 560 aaKnown RBP eCLIP22.22■■□□□ 1.15
UFD1-202ENST00000399523 LRP2BPQ9P2M1 347 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 FOCADQ5VW36 1801 aa22.22■■□□□ 1.15
UFD1-202ENST00000399523 WDR78Q5VTH9 848 aa22.21■■□□□ 1.15
UFD1-202ENST00000399523 LBX2Q6XYB7 198 aa22.21■■□□□ 1.15
UFD1-202ENST00000399523 CATSPERGQ6ZRH7 1159 aa22.21■■□□□ 1.15
UFD1-202ENST00000399523 TRIM34Q9BYJ4 488 aa22.21■■□□□ 1.15
UFD1-202ENST00000399523 PALD1Q9ULE6 856 aa22.21■■□□□ 1.15
UFD1-202ENST00000399523 IVNS1ABPQ9Y6Y0 642 aa22.21■■□□□ 1.15
UFD1-202ENST00000399523 FLT1P17948 1338 aa22.21■■□□□ 1.15
UFD1-202ENST00000399523 COL9A1P20849 921 aa22.2■■□□□ 1.14
UFD1-202ENST00000399523 MCAMP43121 646 aa22.2■■□□□ 1.14
UFD1-202ENST00000399523 GORABQ5T7V8 394 aa22.2■■□□□ 1.14
UFD1-202ENST00000399523 PRDM5Q9NQX1 630 aaPredicted RBP22.2■■□□□ 1.14
UFD1-202ENST00000399523 PDLIM7Q9NR12 457 aa22.2■■□□□ 1.14
UFD1-202ENST00000399523 TRIM60Q495X7 471 aa22.19■■□□□ 1.14
UFD1-202ENST00000399523 C1orf53Q5VUE5 145 aa22.19■■□□□ 1.14
UFD1-202ENST00000399523 NAA16Q6N069 864 aaPredicted RBP22.19■■□□□ 1.14
UFD1-202ENST00000399523 BTBD7Q9P203 1132 aa22.19■■□□□ 1.14
UFD1-202ENST00000399523 TRIM43BA6NCK2 446 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 KBTBD13C9JR72 458 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 E9PSI1 815 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 GH2P01242 217 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 MTX1Q13505 466 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 TJAP1Q5JTD0 557 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 OLFML2BQ68BL8 750 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 SH3RF1Q7Z6J0 888 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 TRIM43Q96BQ3 446 aaPredicted RBP22.18■■□□□ 1.14
UFD1-202ENST00000399523 MEIS3Q99687 375 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 SMC4Q9NTJ3 1288 aa22.18■■□□□ 1.14
UFD1-202ENST00000399523 MYO9BQ13459 2157 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 TNFRSF10AO00220 468 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 SRGAP3O43295 1099 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 UQCRFS1P1P0C7P4 283 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 USP14P54578 494 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 ATF7IPQ6VMQ6 1270 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 ADGRA1Q86SQ6 560 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 FAM9BQ8IZU0 186 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 FEZ1Q99689 392 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 KIAA1683Q9H0B3 1180 aa22.17■■□□□ 1.14
UFD1-202ENST00000399523 SEPT4O43236 478 aa22.16■■□□□ 1.14
UFD1-202ENST00000399523 HLA-DOAP06340 250 aa22.16■■□□□ 1.14
UFD1-202ENST00000399523 VCAM1P19320 739 aa22.16■■□□□ 1.14
UFD1-202ENST00000399523 ZYXQ15942 572 aaKnown RBP22.16■■□□□ 1.14
UFD1-202ENST00000399523 SPDYE16A6NNV3 312 aaPredicted RBP22.15■■□□□ 1.14
UFD1-202ENST00000399523 STRNO43815 780 aa22.15■■□□□ 1.14
UFD1-202ENST00000399523 TATDN1Q6P1N9 297 aa22.15■■□□□ 1.14
UFD1-202ENST00000399523 SAP30BPQ9UHR5 308 aaKnown RBP22.15■■□□□ 1.14
UFD1-202ENST00000399523 ZNF236Q9UL36 1845 aa22.15■■□□□ 1.14
UFD1-202ENST00000399523 ADCYAP1R1P41586 468 aa22.14■■□□□ 1.13
UFD1-202ENST00000399523 ANO1Q5XXA6 986 aa22.14■■□□□ 1.13
UFD1-202ENST00000399523 DPP9Q86TI2 863 aa22.14■■□□□ 1.13
UFD1-202ENST00000399523 USP38Q8NB14 1042 aa22.14■■□□□ 1.13
UFD1-202ENST00000399523 RNPC3Q96LT9 517 aaKnown RBP22.14■■□□□ 1.13
UFD1-202ENST00000399523 NOB1Q9ULX3 412 aaKnown RBP22.14■■□□□ 1.13
UFD1-202ENST00000399523 TACC3Q9Y6A5 838 aa22.14■■□□□ 1.13
UFD1-202ENST00000399523 BDP1A6H8Y1 2624 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 SMCHD1A6NHR9 2005 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 ANP32CO43423 234 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 IGSF3O75054 1194 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 ITGB8P26012 769 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 ADORA2AP29274 412 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 TLE2Q04725 743 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 SLFN5Q08AF3 891 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 GRIN2CQ14957 1233 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 LRRC41Q15345 812 aa22.13■■□□□ 1.13
UFD1-202ENST00000399523 API5Q9BZZ5 524 aaKnown RBP22.13■■□□□ 1.13
UFD1-202ENST00000399523 MYH1P12882 1939 aa22.12■■□□□ 1.13
UFD1-202ENST00000399523 EPHB4P54760 987 aa22.12■■□□□ 1.13
UFD1-202ENST00000399523 ACER1Q8TDN7 264 aa22.12■■□□□ 1.13
UFD1-202ENST00000399523 FERMT2Q96AC1 680 aa22.12■■□□□ 1.13
UFD1-202ENST00000399523 SNRKQ9NRH2 765 aa22.12■■□□□ 1.13
UFD1-202ENST00000399523 MYO5AQ9Y4I1 1855 aaKnown RBP22.11■■□□□ 1.13
UFD1-202ENST00000399523 MOV10L1Q9BXT6 1211 aaKnown RBP22.11■■□□□ 1.13
UFD1-202ENST00000399523 RPAP3Q9H6T3 665 aaPredicted RBP22.11■■□□□ 1.13
UFD1-202ENST00000399523 KIAA0355O15063 1070 aa22.1■■□□□ 1.13
UFD1-202ENST00000399523 COBLO75128 1261 aa22.1■■□□□ 1.13
UFD1-202ENST00000399523 CYP2E1P05181 493 aaPredicted RBP22.1■■□□□ 1.13
UFD1-202ENST00000399523 GNAI3P08754 354 aa22.1■■□□□ 1.13
UFD1-202ENST00000399523 RAB3GAP1Q15042 981 aa22.1■■□□□ 1.13
UFD1-202ENST00000399523 SHCBP1Q8NEM2 672 aa22.1■■□□□ 1.13
UFD1-202ENST00000399523 EHD4Q9H223 541 aa22.1■■□□□ 1.13
UFD1-202ENST00000399523 SERPINB13Q9UIV8 391 aa22.1■■□□□ 1.13
UFD1-202ENST00000399523 PHF24Q9UPV7 400 aa22.1■■□□□ 1.13
UFD1-202ENST00000399523 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.09■■□□□ 1.13
UFD1-202ENST00000399523 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.09■■□□□ 1.13
UFD1-202ENST00000399523 MYCNP04198 464 aaPredicted RBP22.09■■□□□ 1.13
UFD1-202ENST00000399523 CLTBP09497 229 aa22.09■■□□□ 1.13
UFD1-202ENST00000399523 DNAJB2P25686 324 aa22.09■■□□□ 1.13
UFD1-202ENST00000399523 DYNLL1P63167 89 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms