RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 SAMM50Q9Y512 469 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 PRPHP41219 470 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 LAMB3Q13751 1172 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 PPP1R13BQ96KQ4 1090 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 GPR101Q96P66 508 aaPredicted RBP10.62□□□□□ -0.71
SMAD9-203ENST00000399275 PLEKHF1Q96S99 279 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 MIS12Q9H081 205 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 WWC3Q9ULE0 1092 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 NPATQ14207 1427 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 NR1I2O75469 434 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 ABCD1P33897 745 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 PPARDQ03181 441 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 KRT23Q9C075 422 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 CNNM2Q9H8M5 875 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 MTMR7Q9Y216 660 aa10.62□□□□□ -0.71
SMAD9-203ENST00000399275 MORC2Q9Y6X9 1032 aaPredicted RBP10.62□□□□□ -0.71
SMAD9-203ENST00000399275 ZNF202O95125 648 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 AFMP43652 599 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 HAND2P61296 217 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 CALCOCO2Q13137 446 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 NAIF1Q69YI7 327 aaPredicted RBP10.61□□□□□ -0.71
SMAD9-203ENST00000399275 USP33Q8TEY7 942 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 EXOC1Q9NV70 894 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 LZTS1Q9Y250 596 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 ARHGAP42A6NI28 874 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 PSMA7O14818 248 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 ADALQ6DHV7 355 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 NANOGNBQ7Z5D8 188 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 CCDC51Q96ER9 411 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 LRRC27Q9C0I9 530 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 DDX28Q9NUL7 540 aaKnown RBP10.61□□□□□ -0.71
SMAD9-203ENST00000399275 STAP2Q9UGK3 403 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 SLC4A7Q9Y6M7 1214 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 MAP3K7O43318 606 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 DKC1O60832 514 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMAD9-203ENST00000399275 TRHP20396 242 aaPredicted RBP10.61□□□□□ -0.71
SMAD9-203ENST00000399275 ECE1P42892 770 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 PAK2Q13177 524 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 KRT24Q2M2I5 525 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 FAM133BQ5BKY9 247 aaKnown RBP10.61□□□□□ -0.71
SMAD9-203ENST00000399275 TTC6Q86TZ1 520 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 CCDC26Q8TAB7 109 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 LRP2BPQ9P2M1 347 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 CCDC194A0A1B0GVG4 234 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 EVI5O60447 810 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 CUTAO60888 179 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 OLFML1Q6UWY5 402 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.61□□□□□ -0.71
SMAD9-203ENST00000399275 LMBR1Q8WVP7 490 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 TCP11L1Q9NUJ3 509 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 KIAA1468Q9P260 1216 aa10.61□□□□□ -0.71
SMAD9-203ENST00000399275 SNUPNO95149 360 aaKnown RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 FBLN1P23142 703 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 UBXN1Q04323 297 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 MTHFSDQ2M296 383 aaKnown RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 ESCO1Q5FWF5 840 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 HHATQ5VTY9 493 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 LINS1Q8NG48 757 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 RRP36Q96EU6 259 aaKnown RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 CCDC42Q96M95 316 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 RHBDL2Q9NX52 303 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 ANKRD65E5RJM6 399 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 ZNF189O75820 626 aaPredicted RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 RBM6P78332 1123 aaKnown RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 INAQ16352 499 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 CASP10Q92851 521 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 JAKMIP2Q96AA8 810 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 PAG1Q9NWQ8 432 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 PPP2R2CQ9Y2T4 447 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 COMMD10Q9Y6G5 202 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 ACTN3Q08043 901 aaPredicted RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 MFSD6Q6ZSS7 791 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 MYLK4Q86YV6 388 aaPredicted RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 KLHL29Q96CT2 875 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 PLEKHA4Q9H4M7 779 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 NSFL1CQ9UNZ2 370 aaKnown RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 IQCA1LA6NCM1 817 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 RNF113AO15541 343 aaKnown RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 IDEP14735 1019 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 TMEM266Q2M3C6 531 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 CCDC197Q8NCU1 140 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 NDEL1Q9GZM8 345 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 NRBP1Q9UHY1 535 aa10.6□□□□□ -0.71
SMAD9-203ENST00000399275 CTDP1Q9Y5B0 961 aaPredicted RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 POLR1AO95602 1720 aaPredicted RBP10.6□□□□□ -0.71
SMAD9-203ENST00000399275 TRIM75PA6NK02 468 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 TMEM232C9JQI7 657 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 ECM2O94769 699 aaPredicted RBP10.59□□□□□ -0.71
SMAD9-203ENST00000399275 UBA7P41226 1012 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 MTMR3Q13615 1198 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 TLK2Q86UE8 772 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 CALML4Q96GE6 196 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 TTC1Q99614 292 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 DIABLOQ9NR28 239 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 IFIT5Q13325 482 aaKnown RBP10.59□□□□□ -0.71
SMAD9-203ENST00000399275 CLUL1Q15846 466 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 KRT71Q3SY84 523 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 G2E3Q7L622 706 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 SYCP3Q8IZU3 236 aa10.59□□□□□ -0.71
SMAD9-203ENST00000399275 DHX58Q96C10 678 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms