RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 TAOK2Q9UL54 1235 aa13.01□□□□□ -0.33
C4orf3-201ENST00000399075 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
C4orf3-201ENST00000399075 KRT2P35908 639 aa13.01□□□□□ -0.33
C4orf3-201ENST00000399075 TBX2Q13207 712 aaPredicted RBP13.01□□□□□ -0.33
C4orf3-201ENST00000399075 SLC10A5Q5PT55 438 aa13.01□□□□□ -0.33
C4orf3-201ENST00000399075 IQCA1Q86XH1 822 aa13.01□□□□□ -0.33
C4orf3-201ENST00000399075 CABP5Q9NP86 173 aa13.01□□□□□ -0.33
C4orf3-201ENST00000399075 PHLPP2Q6ZVD8 1323 aa13.01□□□□□ -0.33
C4orf3-201ENST00000399075 BAZ2AQ9UIF9 1905 aaKnown RBP13□□□□□ -0.33
C4orf3-201ENST00000399075 ERFEQ4G0M1 354 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 SPECC1Q5M775 1068 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 IFIT1BQ5T764 474 aaKnown RBP13□□□□□ -0.33
C4orf3-201ENST00000399075 CMTR1Q8N1G2 835 aaKnown RBP13□□□□□ -0.33
C4orf3-201ENST00000399075 CCDC82Q8N4S0 544 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 FERMT2Q96AC1 680 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 SHISA4Q96DD7 197 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 INTS13Q9NVM9 706 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 MINPP1Q9UNW1 487 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 MYH13Q9UKX3 1938 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 ORC4O43929 436 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 TROAPQ12815 778 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 CCDC93Q567U6 631 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 FBXO33Q7Z6M2 555 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 ZNF397Q8NF99 534 aaPredicted RBP13□□□□□ -0.33
C4orf3-201ENST00000399075 FAM84BQ96KN1 310 aaPredicted RBP13□□□□□ -0.33
C4orf3-201ENST00000399075 CSRNP2Q9H175 543 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 BCCIPQ9P287 314 aaKnown RBP eCLIP13□□□□□ -0.33
C4orf3-201ENST00000399075 IQSEC3Q9UPP2 1182 aaPredicted RBP13□□□□□ -0.33
C4orf3-201ENST00000399075 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13□□□□□ -0.33
C4orf3-201ENST00000399075 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
C4orf3-201ENST00000399075 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 PLCD1P51178 756 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 ETF1P62495 437 aaKnown RBP12.99□□□□□ -0.33
C4orf3-201ENST00000399075 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
C4orf3-201ENST00000399075 BRMS1Q9HCU9 246 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 OGFRQ9NZT2 677 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 ARHGAP6O43182 974 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 NT5C2P49902 561 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 TMTC3Q6ZXV5 915 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 SH3RF1Q7Z6J0 888 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 ZNF384Q8TF68 577 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 TNFRSF25Q93038 417 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 NFE2L3Q9Y4A8 694 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 TMEM232C9JQI7 657 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 CBX1P83916 185 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 FMR1Q06787 632 aaKnown RBP eCLIP12.99□□□□□ -0.33
C4orf3-201ENST00000399075 NAA30Q147X3 362 aaPredicted RBP12.99□□□□□ -0.33
C4orf3-201ENST00000399075 CTR9Q6PD62 1173 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 TMEM139Q8IV31 216 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 VPS54Q9P1Q0 977 aa12.99□□□□□ -0.33
C4orf3-201ENST00000399075 A0A0G2JS52 829 aa12.98□□□□□ -0.33
C4orf3-201ENST00000399075 ZSCAN12O43309 604 aa12.98□□□□□ -0.33
C4orf3-201ENST00000399075 SLFN14P0C7P3 912 aa12.98□□□□□ -0.33
C4orf3-201ENST00000399075 DYNLL1P63167 89 aaKnown RBP12.98□□□□□ -0.33
C4orf3-201ENST00000399075 NSUN4Q96CB9 384 aaKnown RBP12.98□□□□□ -0.33
C4orf3-201ENST00000399075 TAF1P21675 1872 aa12.98□□□□□ -0.33
C4orf3-201ENST00000399075 SPECC1LQ69YQ0 1117 aa12.98□□□□□ -0.33
C4orf3-201ENST00000399075 SYT10Q6XYQ8 523 aa12.98□□□□□ -0.33
C4orf3-201ENST00000399075 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 GOLGA6L9A6NEM1 432 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 PLEKHA8P1O95397 391 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 ATP8A2Q9NTI2 1148 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 DDX41Q9UJV9 622 aaKnown RBP12.97□□□□□ -0.33
C4orf3-201ENST00000399075 STX10O60499 249 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 TRAPPC10P48553 1259 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 NPY5RQ15761 445 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 SBK1Q52WX2 424 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 USP49Q70CQ1 688 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 REXO1L1PQ8IX06 675 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 LINC00116Q8NCU8 138 aa12.97□□□□□ -0.33
C4orf3-201ENST00000399075 CRNKL1Q9BZJ0 848 aaKnown RBP12.97□□□□□ -0.33
C4orf3-201ENST00000399075 V9GY48 417 aaPredicted RBP12.97□□□□□ -0.33
C4orf3-201ENST00000399075 SMIM22K7EJ46 135 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 TRIM65Q6PJ69 517 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 GSDMAQ96QA5 445 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 PYM1Q9BRP8 204 aaKnown RBP12.96□□□□□ -0.33
C4orf3-201ENST00000399075 SRRTQ9BXP5 876 aaKnown RBP12.96□□□□□ -0.33
C4orf3-201ENST00000399075 NYXQ9GZU5 481 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 CYP2D7A0A087X1C5 515 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 A0A1B0GTH6 734 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 FAM205CA6NFA0 338 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 USP17L12C9JPN9 530 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 USP17L21D6R901 530 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 ADAMTS2O95450 1211 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 ATP2C1P98194 919 aaPredicted RBP12.96□□□□□ -0.33
C4orf3-201ENST00000399075 EARS2Q5JPH6 523 aaKnown RBP12.96□□□□□ -0.33
C4orf3-201ENST00000399075 HOMER1Q86YM7 354 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 GRAMD1CQ8IYS0 662 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 PDILTQ8N807 584 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 CELF1Q92879 486 aaKnown RBP12.96□□□□□ -0.33
C4orf3-201ENST00000399075 MED15Q96RN5 788 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 ARPP21Q9UBL0 812 aaPredicted RBP12.96□□□□□ -0.33
C4orf3-201ENST00000399075 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.96□□□□□ -0.33
C4orf3-201ENST00000399075 CCDC88AQ3V6T2 1871 aa12.96□□□□□ -0.33
C4orf3-201ENST00000399075 ATP2B1P20020 1258 aa12.96□□□□□ -0.34
C4orf3-201ENST00000399075 MECOMQ03112 1051 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms