RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 TTC16Q8NEE8 873 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-205ENST00000399050 TBC1D31Q96DN5 1066 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 HDAC9Q9UKV0 1011 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 BUB1O43683 1085 aa9.59□□□□□ -0.88
CTNND1-205ENST00000399050 RNF40O75150 1001 aa9.59□□□□□ -0.88
CTNND1-205ENST00000399050 CLUL1Q15846 466 aa9.59□□□□□ -0.88
CTNND1-205ENST00000399050 NAP1L4Q99733 375 aaKnown RBP9.59□□□□□ -0.88
CTNND1-205ENST00000399050 TBC1D7Q9P0N9 293 aa9.59□□□□□ -0.88
CTNND1-205ENST00000399050 KIAA0556O60303 1618 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 F8W031 263 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-205ENST00000399050 ZNF827Q17R98 1081 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 INF2Q27J81 1249 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 CABP7Q86V35 215 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 CCDC105Q8IYK2 499 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 VPS52Q8N1B4 723 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 SLC35F6Q8N357 371 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 RAB3IL1Q8TBN0 382 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 NBPF6Q5VWK0 638 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 NBPF5PQ86XG9 351 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-205ENST00000399050 FAM212AQ96EL1 285 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 EDC3Q96F86 508 aaKnown RBP9.58□□□□□ -0.88
CTNND1-205ENST00000399050 NBPF4Q96M43 638 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 CLIC6Q96NY7 704 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 FAM169AQ9Y6X4 670 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 KIF3CO14782 793 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 HNRNPH2P55795 449 aaKnown RBP9.58□□□□□ -0.88
CTNND1-205ENST00000399050 TRAF1Q13077 416 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 CEP120Q8N960 986 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 IQCDQ96DY2 449 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 GBP5Q96PP8 586 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 LSM14BQ9BX40 385 aaKnown RBP9.58□□□□□ -0.88
CTNND1-205ENST00000399050 FAM114A2Q9NRY5 505 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 VPS54Q9P1Q0 977 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 CTTNBP2NLQ9P2B4 639 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 NCKAP5LQ9HCH0 1330 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 KCNK3O14649 394 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 ARL1P40616 181 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-205ENST00000399050 SCRN1Q12765 414 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 FBXO38Q6PIJ6 1188 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 CCDC170Q8IYT3 715 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 PARP2Q9UGN5 583 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 ZBTB21Q9ULJ3 1066 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 MAP3K19Q56UN5 1328 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 ADCY9O60503 1353 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 KIAA0232Q92628 1395 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 EDC4Q6P2E9 1401 aaKnown RBP9.58□□□□□ -0.88
CTNND1-205ENST00000399050 TXNDC9O14530 226 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 FLOT1O75955 427 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 PHLDB2Q86SQ0 1253 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 NLRC4Q9NPP4 1024 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 SPTLC3Q9NUV7 552 aa9.58□□□□□ -0.88
CTNND1-205ENST00000399050 NIP7Q9Y221 180 aaKnown RBP eCLIP9.58□□□□□ -0.88
CTNND1-205ENST00000399050 CLTAP09496 248 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 ATP5JP18859 108 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 HSPA1LP34931 641 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 KCTD16Q68DU8 428 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 ZNF804AQ7Z570 1209 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 CCDC84Q86UT8 332 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-205ENST00000399050 PLBD2Q8NHP8 589 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 NUCKS1Q9H1E3 243 aaKnown RBP9.57□□□□□ -0.88
CTNND1-205ENST00000399050 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-205ENST00000399050 YTHDC2Q9H6S0 1430 aaKnown RBP9.57□□□□□ -0.88
CTNND1-205ENST00000399050 hCG_1642624A0A1W2PR95 340 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 STX2P32856 288 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 PTPN21Q16825 1174 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 DZIP3Q86Y13 1208 aaKnown RBP9.57□□□□□ -0.88
CTNND1-205ENST00000399050 HAUS4Q9H6D7 363 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 PTPRTO14522 1441 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 RPSAP08865 295 aaKnown RBP9.57□□□□□ -0.88
CTNND1-205ENST00000399050 PEX19P40855 299 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 RASSF2P50749 326 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 NCBP1Q09161 790 aaKnown RBP9.57□□□□□ -0.88
CTNND1-205ENST00000399050 CUL4AQ13619 759 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 TERF2Q15554 542 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 TRIML1Q8N9V2 468 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 PARD6BQ9BYG5 372 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 SAP30BPQ9UHR5 308 aaKnown RBP9.57□□□□□ -0.88
CTNND1-205ENST00000399050 KRIT1O00522 736 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 ADCK5Q3MIX3 580 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 SPATA1Q5VX52 437 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 EFCC1Q9HA90 598 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 SBNO1A3KN83 1393 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 KRT15P19012 456 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 ITGA6P23229 1130 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 CEBPAP49715 358 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-205ENST00000399050 IFT88Q13099 833 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 NOSTRINQ8IVI9 506 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 NELFCDQ8IXH7 590 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 SSH3Q8TE77 659 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 EXOC4Q96A65 974 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 AMFRQ9UKV5 643 aa9.57□□□□□ -0.88
CTNND1-205ENST00000399050 ZMYM6O95789 1325 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 ZNF608Q9ULD9 1512 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-205ENST00000399050 HOXB7P09629 217 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 PPP1R21Q6ZMI0 780 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 JAG2Q9Y219 1238 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 EPN1Q9Y6I3 576 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-205ENST00000399050 A0A087WWV3 80 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 ENC1O14682 589 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms