RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SPATA5Q8NB90 893 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 MRPS27Q92552 414 aaKnown RBP11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 ZNF804BA4D1E1 1349 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 PPFIA4O75335 1185 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 ERLIN1O75477 346 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 GOLGA8FQ08AF8 430 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 GOLGA8DPQ0D2H9 430 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 ATL3Q6DD88 541 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 NAA16Q6N069 864 aaPredicted RBP11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 ADGRA1Q86SQ6 560 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 KBTBD3Q8NAB2 608 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 CNNM3Q8NE01 707 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 ANKZF1Q9H8Y5 726 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 POTEB2H3BUK9 544 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 CBFA2T2O43439 604 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 FOSBP53539 338 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 CHMP4BP1P59074 171 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 TMEM139Q8IV31 216 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 DPF2Q92785 391 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 BRIP1Q9BX63 1249 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 PLEKHA4Q9H4M7 779 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 GPR108Q9NPR9 543 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 RAB21Q9UL25 225 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 L1RE1Q9UN81 338 aa11.53□□□□□ -0.56
HMGCLL1-205ENST00000398661 COL1A1P02452 1464 aaPredicted RBP11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 A0A1B0GVL5 298 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 HIP1O00291 1037 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 BIN1O00499 593 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 C21orf2O43822 256 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 PRDX5P30044 214 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 MAP2K2P36507 400 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 UBASH3AP57075 661 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 HAND2P61296 217 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 DNAJC21Q5F1R6 531 aaKnown RBP11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 SRGAP1Q7Z6B7 1085 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 MAGEB6Q8N7X4 407 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 ANKRD20A12PQ8NF67 263 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 ZSWIM4Q9H7M6 989 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 INCENPQ9NQS7 918 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 DENND2AQ9ULE3 1009 aa11.52□□□□□ -0.56
HMGCLL1-205ENST00000398661 IKBKBO14920 756 aa11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 KIF1CO43896 1103 aaKnown RBP11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 ATP1A3P13637 1013 aa11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 HSP90B1P14625 803 aaKnown RBP11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 EVX2Q03828 476 aa11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 HSP90B2PQ58FF3 399 aa11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 VSTM4Q8IW00 320 aa11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 CCDC102AQ96A19 550 aa11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 ABCB6Q9NP58 842 aa11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 PCDHA7Q9UN72 937 aa11.52□□□□□ -0.57
HMGCLL1-205ENST00000398661 COL24A1Q17RW2 1714 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 F8W031 263 aaPredicted RBP11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 PPEF1O14829 653 aaPredicted RBP11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 CUTAO60888 179 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 SERPINC1P01008 464 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 TOP1P11387 765 aaKnown RBP11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 NDUFA8P51970 172 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 MSANTD4Q8NCY6 345 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 FLAD1Q8NFF5 587 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 SMARCC2Q8TAQ2 1214 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 CCDC12Q8WUD4 166 aaPredicted RBP11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 RBM17Q96I25 401 aaKnown RBP11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 PNKPQ96T60 521 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 FAM107BQ9H098 131 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 HSD3B7Q9H2F3 369 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 SUGCTQ9HAC7 445 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 LRP2BPQ9P2M1 347 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 SUFUQ9UMX1 484 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 PRKAB2O43741 272 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 PPFIA3O75145 1194 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 ADALQ6DHV7 355 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 ZNF384Q8TF68 577 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 DBNDD1Q9H9R9 158 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 FBXO3Q9UK99 471 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 MAST3O60307 1309 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 ZNF532Q9HCE3 1301 aa11.51□□□□□ -0.57
HMGCLL1-205ENST00000398661 CCDC196A0A1B0GTZ2 297 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 A0A1W2PQ27 194 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 A0A1W2PQ64 194 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 A0A1W2PQD8 194 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 DPEP1P16444 411 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 CFAP100Q494V2 611 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 WWC2Q6AWC2 1192 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 Q6ZUG5 572 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 CHST3Q7LGC8 479 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 BAG1Q99933 345 aaPredicted RBP11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 LRRC2Q9BYS8 371 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 FAM204AQ9H8W3 233 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 RAI14Q9P0K7 980 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 NEDD4P46934 1319 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 RTL9Q8NET4 1388 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 ANKRD31Q8N7Z5 1873 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 PHACTR2O75167 634 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 HIBADHP31937 336 aaKnown RBP11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 SCRN1Q12765 414 aa11.5□□□□□ -0.57
HMGCLL1-205ENST00000398661 CASP8Q14790 479 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 281.5 ms