RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZBTB7BO15156 539 aaPredicted RBP15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 NLRP10Q86W26 655 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 PAXBP1Q9Y5B6 917 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 CTAGE9A4FU28 777 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 ARPP21Q9UBL0 812 aaPredicted RBP15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 FRMD4BQ9Y2L6 1034 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 PROSER3Q2NL68 480 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 WDR44Q5JSH3 913 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 ANO3Q9BYT9 981 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 DHX32Q7L7V1 743 aaKnown RBP15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 USP17L3A6NCW0 530 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 USP17L4A6NCW7 530 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 CFBP00751 764 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 OSBPP22059 807 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 SLC8A3P57103 927 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 TRPC3Q13507 836 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 USP17L1Q7RTZ2 530 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 FAM200AQ8TCP9 573 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 IFT81Q8WYA0 676 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 PRAMEF22A3QJZ6 481 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 CTDSPL2Q05D32 466 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 C2orf69Q8N8R5 385 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 CTNND2Q9UQB3 1225 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 ATP2A1O14983 1001 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 SMTNP53814 917 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 CCDC77Q9BR77 488 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 NDUFB9Q9Y6M9 179 aa15.94■□□□□ 0.14
PCDHA11-201ENST00000398640 C8orf34Q49A92 452 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 CCDC125Q86Z20 511 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 HAUS7Q99871 368 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 SSH2Q76I76 1423 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 IREB2P48200 963 aaKnown RBP15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 KRT83P78385 493 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 PPP1R7Q15435 360 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 TXNDC16Q9P2K2 825 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 PIK3AP1Q6ZUJ8 805 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 SV2BQ7L1I2 683 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 GPIHBP1Q8IV16 184 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 GOLGA1Q92805 767 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 BMS1Q14692 1282 aaKnown RBP15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 SEC31BQ9NQW1 1179 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 FAM169AQ9Y6X4 670 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 TRPM1Q7Z4N2 1603 aa15.93■□□□□ 0.14
PCDHA11-201ENST00000398640 TYRO3Q06418 890 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 SEMA3EO15041 775 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 CCDC6Q16204 474 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 BEND3Q5T5X7 828 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 SUSD4Q5VX71 490 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 QRICH2Q9H0J4 1663 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 DIP2AQ14689 1571 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 CPS1P31327 1500 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 KRT86O43790 486 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 KRT19P08727 400 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 ZNF710Q8N1W2 664 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 IFNKQ9P0W0 207 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 ZHX1Q9UKY1 873 aaPredicted RBP15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 CCDC65Q8IXS2 484 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 ATRIPQ8WXE1 791 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 TRAF5O00463 557 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 TXKP42681 527 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 CERKLQ49MI3 558 aaPredicted RBP15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 ZNF569Q5MCW4 686 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 CHURC1Q8WUH1 139 aa15.92■□□□□ 0.14
PCDHA11-201ENST00000398640 A0A1B0GVL5 298 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 SEC24BO95487 1268 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 KMT5BQ4FZB7 885 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 ZBTB16Q05516 673 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 METTL13Q8N6R0 699 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 PLEKHF1Q96S99 279 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 IBTKQ9P2D0 1353 aaPredicted RBP15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 ARHGEF35A5YM69 484 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 GABPAQ06546 454 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 ODF2LQ9ULJ1 636 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 AGTPBP1Q9UPW5 1226 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 MAPK8IP1Q9UQF2 711 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 SNX16P57768 344 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 EZH2Q15910 746 aaKnown RBP15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 LRRC24Q50LG9 513 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 ATP10DQ9P241 1426 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 DAPK3O43293 454 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 TBC1D9BQ66K14 1250 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 IQUBQ8NA54 791 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 KBTBD3Q8NAB2 608 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 IPO4Q8TEX9 1081 aaKnown RBP15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 PREX1Q8TCU6 1659 aa15.91■□□□□ 0.14
PCDHA11-201ENST00000398640 TLDC2A0PJX2 215 aa15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 EPB41P11171 864 aaKnown RBP15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 SYNE4Q8N205 404 aa15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 NSRP1Q9H0G5 558 aaKnown RBP15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 GLT8D2Q9H1C3 349 aa15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 UAP1Q16222 522 aaPredicted RBP15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 DNAJC21Q5F1R6 531 aaKnown RBP15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 OTUD7AQ8TE49 926 aaPredicted RBP15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 PNMA6EA0A0J9YXQ4 647 aa15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 STX10O60499 249 aa15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 DNM2P50570 870 aa15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 NOLC1Q14978 699 aaKnown RBP eCLIP15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 PPP1R21Q6ZMI0 780 aa15.9■□□□□ 0.14
PCDHA11-201ENST00000398640 RHOXF2BP0C7M4 288 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms