RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 NDEL1Q9GZM8 345 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 RPRD1BQ9NQG5 326 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 PDRG1Q9NUG6 133 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 STX8Q9UNK0 236 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 KIAA0232Q92628 1395 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 PXDNLA1KZ92 1463 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 OPLAHO14841 1288 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 RBM10P98175 930 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 ASPHQ12797 758 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 PLS1Q14651 629 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 WTAPQ15007 396 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 FASTKD5Q7L8L6 764 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 TADA2BQ86TJ2 420 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 KIF18AQ8NI77 898 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.03□□□□□ -1.924e-7■■■■□ 24.4
CHD9-202ENST00000398510 BZW2Q9Y6E2 419 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA8MH3BSY2 632 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CRCPO75575 148 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 IFNA8P32881 189 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 FYB2Q5VWT5 728 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 NBPF11Q86T75 865 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CCDC26Q8TAB7 109 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 VPS50Q96JG6 964 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 DHX36Q9H2U1 1008 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 STIM2Q9P246 746 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 PEAK1Q9H792 1746 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 MYO9BQ13459 2157 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 K7ELQ4 463 aaPredicted RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 EPB41P11171 864 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 NEK4P51957 841 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CCDC40Q4G0X9 1142 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 BZW1Q7L1Q6 419 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 RIOK1Q9BRS2 568 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 TRPC6Q9Y210 931 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 DOT1LQ8TEK3 1739 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 SCN11AQ9UI33 1791 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CTAGE9A4FU28 777 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 GNPATO15228 680 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 RANBP6O60518 1105 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 MAPK8IP2Q13387 824 aaPredicted RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 OTUD6BQ8N6M0 293 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 ZNF622Q969S3 477 aaKnown RBP eCLIP3.03□□□□□ -1.926e-7■■■□□ 18.6
CHD9-202ENST00000398510 TSSK1BQ9BXA7 367 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 ZHX3Q9H4I2 956 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 ORC6Q9Y5N6 252 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CCDC88CQ9P219 2028 aa3.03□□□□□ -1.93
CHD9-202ENST00000398510 OSBPP22059 807 aa3.03□□□□□ -1.93
CHD9-202ENST00000398510 HNRNPH2P55795 449 aaKnown RBP3.03□□□□□ -1.93
CHD9-202ENST00000398510 PALM2Q8IXS6 379 aa3.03□□□□□ -1.93
CHD9-202ENST00000398510 CEP120Q8N960 986 aa3.03□□□□□ -1.93
CHD9-202ENST00000398510 KIFC2Q96AC6 838 aa3.03□□□□□ -1.93
CHD9-202ENST00000398510 SPAG5Q96R06 1193 aa3.03□□□□□ -1.93
CHD9-202ENST00000398510 RIC8AQ9NPQ8 531 aa3.03□□□□□ -1.93
CHD9-202ENST00000398510 LMCD1Q9NZU5 365 aa3.03□□□□□ -1.93
CHD9-202ENST00000398510 TOPAZ1Q8N9V7 1692 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 AP3B1O00203 1094 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 IARSP41252 1262 aaKnown RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 SSR1P43307 286 aaKnown RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 AMPD2Q01433 879 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 DHX32Q7L7V1 743 aaKnown RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 ZNF354CQ86Y25 554 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CCDC65Q8IXS2 484 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 NAV1Q8NEY1 1877 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 SH3TC2Q8TF17 1288 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 PSPC1Q8WXF1 523 aaKnown RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 OTUB1Q96FW1 271 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 SIN3AQ96ST3 1273 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 SEPT10Q9P0V9 454 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 NFU1Q9UMS0 254 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 PTPRTO14522 1441 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 N4BP2Q86UW6 1770 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 A0A1W2PRG0 241 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 SYCE3A1L190 88 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 BRAFP15056 766 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ANXA13P27216 316 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 SREBF2Q12772 1141 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 BMP2KLQ5H9B9 411 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CCDC183Q5T5S1 534 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 NLRX1Q86UT6 975 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 FAM43AQ8N2R8 423 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 RAB42Q8N4Z0 105 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 COA7Q96BR5 231 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 FNBP1Q96RU3 617 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 INO80BQ9C086 356 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 UBE4BO95155 1302 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 TNS3Q68CZ2 1445 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CITO14578 2027 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 TBC1D12O60347 775 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 FLOT1O75955 427 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ATP2B4P23634 1241 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ARL1P40616 181 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 TNNC1P63316 161 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 TSPY1Q01534 308 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 KRT28Q7Z3Y7 464 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ZBTB8OSQ8IWT0 167 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ATRIPQ8WXE1 791 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 APOA4P06727 396 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 KRT2P35908 639 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 SKP1P63208 163 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 SURF1Q15526 300 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms