RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 GPT2Q8TD30 523 aa22.53■■□□□ 1.2
PDLIM2-204ENST00000397760 TRPM4Q8TD43 1214 aa22.53■■□□□ 1.2
PDLIM2-204ENST00000397760 MYL10Q9BUA6 226 aa22.53■■□□□ 1.2
PDLIM2-204ENST00000397760 ASTN2O75129 1339 aaPredicted RBP22.53■■□□□ 1.2
PDLIM2-204ENST00000397760 FAM196BA6NMK8 535 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 RXRAP19793 462 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 TNFAIP1Q13829 316 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 HS1BP3Q53T59 392 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 DGKHQ86XP1 1220 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 LLPHQ9BRT6 129 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 HACL1Q9UJ83 578 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 DHX16O60231 1041 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 AKR1B1P15121 316 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 NCLP19338 710 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 GJB2P29033 226 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 LMOD1P29536 600 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 RCSD1Q6JBY9 416 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 ZNF654Q8IZM8 581 aa22.52■■□□□ 1.2
PDLIM2-204ENST00000397760 GOLGA8AA7E2F4 631 aa22.51■■□□□ 1.19
PDLIM2-204ENST00000397760 RASA3Q14644 834 aa22.51■■□□□ 1.19
PDLIM2-204ENST00000397760 CATIPQ7Z7H3 387 aa22.51■■□□□ 1.19
PDLIM2-204ENST00000397760 ANKS1AQ92625 1134 aa22.51■■□□□ 1.19
PDLIM2-204ENST00000397760 SCAF8Q9UPN6 1271 aaKnown RBP22.51■■□□□ 1.19
PDLIM2-204ENST00000397760 JAK2O60674 1132 aa22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 CTDNEP1O95476 244 aa22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 CCDC144CPQ8IYA2 1237 aa22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 NSUN7Q8NE18 718 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 CCDC17Q96LX7 622 aa22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 HERC5Q9UII4 1024 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 RCAN1P53805 252 aa22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 CERKLQ49MI3 558 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 TATDN1Q6P1N9 297 aa22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 LRSAM1Q6UWE0 723 aa22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 NUP133Q8WUM0 1156 aa22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 SYAP1Q96A49 352 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 PGAP2Q9UHJ9 254 aa22.5■■□□□ 1.19
PDLIM2-204ENST00000397760 CPLX1O14810 134 aa22.49■■□□□ 1.19
PDLIM2-204ENST00000397760 ADD1P35611 737 aaKnown RBP22.49■■□□□ 1.19
PDLIM2-204ENST00000397760 HIRAP54198 1017 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-204ENST00000397760 SMARCC2Q8TAQ2 1214 aa22.49■■□□□ 1.19
PDLIM2-204ENST00000397760 KAT14Q9H8E8 782 aa22.49■■□□□ 1.19
PDLIM2-204ENST00000397760 STX8Q9UNK0 236 aa22.49■■□□□ 1.19
PDLIM2-204ENST00000397760 ZC3H4Q9UPT8 1303 aaKnown RBP22.49■■□□□ 1.19
PDLIM2-204ENST00000397760 PLIN4Q96Q06 1357 aa22.49■■□□□ 1.19
PDLIM2-204ENST00000397760 MPHOSPH10O00566 681 aaKnown RBP22.48■■□□□ 1.19
PDLIM2-204ENST00000397760 CDC27P30260 824 aa22.48■■□□□ 1.19
PDLIM2-204ENST00000397760 ANGEL2Q5VTE6 544 aaKnown RBP22.48■■□□□ 1.19
PDLIM2-204ENST00000397760 CDAN1Q8IWY9 1227 aa22.48■■□□□ 1.19
PDLIM2-204ENST00000397760 CEP95Q96GE4 821 aa22.48■■□□□ 1.19
PDLIM2-204ENST00000397760 ADARB2Q9NS39 739 aaKnown RBP22.48■■□□□ 1.19
PDLIM2-204ENST00000397760 PTPDC1A2A3K4 754 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 RTN1Q16799 776 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 FANCBQ8NB91 859 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 TMEM87AQ8NBN3 555 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 FAM217BQ9NTX9 383 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 IGKV6D-41A0A0C4DH26 115 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 DDAH1O94760 285 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 CALM1P0DP23 149 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 CALM2P0DP24 149 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 CALM3P0DP25 149 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 PDIA4P13667 645 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 TROAPQ12815 778 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 DDX11Q96FC9 970 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 TMEM47Q9BQJ4 181 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 DEFB129Q9H1M3 183 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 SIPA1L1O43166 1804 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 NID2Q14112 1375 aa22.47■■□□□ 1.19
PDLIM2-204ENST00000397760 HMGN5P82970 282 aaKnown RBP22.46■■□□□ 1.19
PDLIM2-204ENST00000397760 CPLX2Q6PUV4 134 aaKnown RBP22.46■■□□□ 1.19
PDLIM2-204ENST00000397760 APOBEC3FQ8IUX4 373 aaKnown RBP22.46■■□□□ 1.19
PDLIM2-204ENST00000397760 L3MBTL3Q96JM7 780 aaPredicted RBP22.46■■□□□ 1.19
PDLIM2-204ENST00000397760 MTMR4Q9NYA4 1195 aa22.46■■□□□ 1.19
PDLIM2-204ENST00000397760 CCDC196A0A1B0GTZ2 297 aa22.45■■□□□ 1.19
PDLIM2-204ENST00000397760 GLTPD2A6NH11 291 aa22.45■■□□□ 1.19
PDLIM2-204ENST00000397760 TBC1D12O60347 775 aa22.45■■□□□ 1.19
PDLIM2-204ENST00000397760 PPFIA3O75145 1194 aa22.45■■□□□ 1.19
PDLIM2-204ENST00000397760 NOVP48745 357 aa22.45■■□□□ 1.19
PDLIM2-204ENST00000397760 PNMA1Q8ND90 353 aa22.45■■□□□ 1.19
PDLIM2-204ENST00000397760 TEPSINQ96N21 525 aa22.45■■□□□ 1.19
PDLIM2-204ENST00000397760 GGA3Q9NZ52 723 aa22.45■■□□□ 1.19
PDLIM2-204ENST00000397760 PPP2R5BQ15173 497 aa22.45■■□□□ 1.18
PDLIM2-204ENST00000397760 MIGA2Q7L4E1 593 aa22.45■■□□□ 1.18
PDLIM2-204ENST00000397760 FAM184AQ8NB25 1140 aa22.45■■□□□ 1.18
PDLIM2-204ENST00000397760 PDLIM2Q96JY6 352 aa22.45■■□□□ 1.18
PDLIM2-204ENST00000397760 TMEM63CQ9P1W3 806 aa22.45■■□□□ 1.18
PDLIM2-204ENST00000397760 CDKL5O76039 1030 aa22.44■■□□□ 1.18
PDLIM2-204ENST00000397760 GDF11O95390 407 aa22.44■■□□□ 1.18
PDLIM2-204ENST00000397760 TOP1P11387 765 aaKnown RBP22.44■■□□□ 1.18
PDLIM2-204ENST00000397760 SYT1P21579 422 aa22.44■■□□□ 1.18
PDLIM2-204ENST00000397760 ABCB5Q2M3G0 1257 aa22.44■■□□□ 1.18
PDLIM2-204ENST00000397760 LARP1BQ659C4 914 aaKnown RBP22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 RBSNQ9H1K0 784 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 TTLL1O95922 423 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 PDCP20941 246 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 MAP3K10Q02779 954 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 RRP1BQ14684 758 aaKnown RBP22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 NTRK3Q16288 839 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 SHROOM1Q2M3G4 852 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms