RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 KCNB2Q92953 911 aa15.69■□□□□ 0.1
SEC13-209ENST00000397117 FAM163AQ96GL9 167 aaPredicted RBP15.69■□□□□ 0.1
SEC13-209ENST00000397117 HTATIP2Q9BUP3 242 aa15.69■□□□□ 0.1
SEC13-209ENST00000397117 NAPBQ9H115 298 aa15.69■□□□□ 0.1
SEC13-209ENST00000397117 A0A0G2JLL6 359 aaPredicted RBP15.68■□□□□ 0.1
SEC13-209ENST00000397117 FOXP2O15409 715 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 PRKAB2O43741 272 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 PLCG2P16885 1265 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 TDO2P48775 406 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 KRT32Q14532 448 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 PRRT2Q7Z6L0 340 aaPredicted RBP15.68■□□□□ 0.1
SEC13-209ENST00000397117 IFNL3Q8IZI9 196 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 SLAIN1Q8ND83 568 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 IDI2Q9BXS1 227 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 UNC93B1Q9H1C4 597 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 BIN2Q9UBW5 565 aaPredicted RBP15.68■□□□□ 0.1
SEC13-209ENST00000397117 AFG3L2Q9Y4W6 797 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 GPR75-ASB3A0A0A6YYF3 556 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 GSG1L2A8MUP6 293 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 PTPRAP18433 802 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 BTDP43251 543 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 PPP4CP60510 307 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 ALX1Q15699 326 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 SH3BP5LQ7L8J4 393 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 FASTKD5Q7L8L6 764 aaKnown RBP15.68■□□□□ 0.1
SEC13-209ENST00000397117 SCYL3Q8IZE3 742 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 U2AF1L4Q8WU68 220 aaKnown RBP15.68■□□□□ 0.1
SEC13-209ENST00000397117 IL17RAQ96F46 866 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 ZHX2Q9Y6X8 837 aa15.68■□□□□ 0.1
SEC13-209ENST00000397117 RANBP2P49792 3224 aaKnown RBP15.67■□□□□ 0.1
SEC13-209ENST00000397117 GAKO14976 1311 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 ZMYM6O95789 1325 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 ZNF213O14771 459 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 ADCY3O60266 1144 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 ENTPD3O75355 529 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 SGPL1O95470 568 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 CYP21A2P08686 494 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 PSMA5P28066 241 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 BECN1Q14457 450 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 SDR42E1Q8WUS8 393 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 DAXXQ9UER7 740 aaPredicted RBP15.67■□□□□ 0.1
SEC13-209ENST00000397117 SLC45A1Q9Y2W3 748 aa15.67■□□□□ 0.1
SEC13-209ENST00000397117 ST18O60284 1047 aa15.66■□□□□ 0.1
SEC13-209ENST00000397117 FARP2O94887 1054 aaPredicted RBP15.66■□□□□ 0.1
SEC13-209ENST00000397117 TSGA10IPQ3SY00 556 aa15.66■□□□□ 0.1
SEC13-209ENST00000397117 GIMAP6Q6P9H5 292 aa15.66■□□□□ 0.1
SEC13-209ENST00000397117 JAKMIP1Q96N16 626 aaKnown RBP15.66■□□□□ 0.1
SEC13-209ENST00000397117 EPB41L4AQ9HCS5 686 aaPredicted RBP15.66■□□□□ 0.1
SEC13-209ENST00000397117 PICK1Q9NRD5 415 aa15.66■□□□□ 0.1
SEC13-209ENST00000397117 ATP8A2Q9NTI2 1148 aa15.66■□□□□ 0.1
SEC13-209ENST00000397117 NR2E3Q9Y5X4 410 aa15.66■□□□□ 0.1
SEC13-209ENST00000397117 DOCK1Q14185 1865 aa15.66■□□□□ 0.1
SEC13-209ENST00000397117 CAPN2P17655 700 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 CASTP20810 708 aaKnown RBP15.65■□□□□ 0.1
SEC13-209ENST00000397117 USP5P45974 858 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 FLT3LGP49771 235 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 NEK4P51957 841 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 HAND2P61296 217 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 IL27Q8NEV9 243 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 PXYLP1Q8TE99 480 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 SH3RF3Q8TEJ3 882 aaPredicted RBP15.65■□□□□ 0.1
SEC13-209ENST00000397117 IPO9Q96P70 1041 aaKnown RBP15.65■□□□□ 0.1
SEC13-209ENST00000397117 TM6SF1Q9BZW5 370 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 SLURP2P0DP57 97 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 IRF5Q13568 498 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 GADL1Q6ZQY3 521 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 HSCBQ8IWL3 235 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 TEX11Q8IYF3 940 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 CYP46A1Q9Y6A2 500 aa15.65■□□□□ 0.1
SEC13-209ENST00000397117 ALPK3Q96L96 1907 aa15.64■□□□□ 0.09
SEC13-209ENST00000397117 DDTLA6NHG4 134 aaPredicted RBP15.64■□□□□ 0.09
SEC13-209ENST00000397117 CTNND1O60716 968 aaKnown RBP15.64■□□□□ 0.09
SEC13-209ENST00000397117 ELNP15502 786 aa15.64■□□□□ 0.09
SEC13-209ENST00000397117 ADCK5Q3MIX3 580 aa15.64■□□□□ 0.09
SEC13-209ENST00000397117 UPF3BQ9BZI7 483 aaKnown RBP15.64■□□□□ 0.09
SEC13-209ENST00000397117 DDX4Q9NQI0 724 aaKnown RBP15.64■□□□□ 0.09
SEC13-209ENST00000397117 E7EWF7 191 aa15.63■□□□□ 0.09
SEC13-209ENST00000397117 INHAP05111 366 aa15.63■□□□□ 0.09
SEC13-209ENST00000397117 BLOC1S2Q6QNY1 142 aa15.63■□□□□ 0.09
SEC13-209ENST00000397117 AMOTL1Q8IY63 956 aa15.63■□□□□ 0.09
SEC13-209ENST00000397117 TGFBRAP1Q8WUH2 860 aa15.63■□□□□ 0.09
SEC13-209ENST00000397117 DCP1AQ9NPI6 582 aaPredicted RBP15.63■□□□□ 0.09
SEC13-209ENST00000397117 TAF6LQ9Y6J9 622 aa15.63■□□□□ 0.09
SEC13-209ENST00000397117 MINDY4BA8MYZ0 360 aa15.62■□□□□ 0.09
SEC13-209ENST00000397117 HMGB1P09429 215 aaKnown RBP15.62■□□□□ 0.09
SEC13-209ENST00000397117 ZSCAN29Q8IWY8 852 aaPredicted RBP15.62■□□□□ 0.09
SEC13-209ENST00000397117 SNX21Q969T3 373 aa15.62■□□□□ 0.09
SEC13-209ENST00000397117 NEK1Q96PY6 1258 aa15.62■□□□□ 0.09
SEC13-209ENST00000397117 CRISPLD2Q9H0B8 497 aa15.62■□□□□ 0.09
SEC13-209ENST00000397117 ZSWIM6Q9HCJ5 1215 aa15.62■□□□□ 0.09
SEC13-209ENST00000397117 PAK6Q9NQU5 681 aaPredicted RBP15.62■□□□□ 0.09
SEC13-209ENST00000397117 A0A1W2PPC1 479 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 TNPO2O14787 897 aaKnown RBP15.61■□□□□ 0.09
SEC13-209ENST00000397117 TFRCP02786 760 aaKnown RBP15.61■□□□□ 0.09
SEC13-209ENST00000397117 RHBDL3P58872 404 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 TRDNQ13061 729 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 RUFY3Q7L099 469 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 DEFB118Q96PH6 123 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 MCM9Q9NXL9 1143 aa15.61■□□□□ 0.09
SEC13-209ENST00000397117 ARPP21Q9UBL0 812 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms