RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 USP17L21D6R901 530 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 PRKAB2O43741 272 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 GRK4P32298 578 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 JAG1P78504 1218 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 PRKCZQ05513 592 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 C16orf86Q6ZW13 317 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 ANKRD13CQ8N6S4 541 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 COA7Q96BR5 231 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 FSD1Q9BTV5 496 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 MORF4L1Q9UBU8 362 aa16.7■□□□□ 0.26
SEC13-204ENST00000397099 PDE4DIPQ5VU43 2346 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 USP17L15C9J2P7 530 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 USP17L13C9JLJ4 530 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 USP17L11C9JVI0 530 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 USP17L18D6R9N7 530 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 USP17L22D6RA61 530 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 USP17L17D6RBQ6 530 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 USP17L19D6RCP7 530 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 USP17L20D6RJB6 530 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 MPHOSPH10O00566 681 aaKnown RBP16.69■□□□□ 0.26
SEC13-204ENST00000397099 TNPO2O14787 897 aaKnown RBP16.69■□□□□ 0.26
SEC13-204ENST00000397099 GPAA1O43292 621 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 CAPN2P17655 700 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 PDE1AP54750 535 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 USP17L24Q0WX57 530 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 CTR9Q6PD62 1173 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 OSBP2Q969R2 916 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 ARHGEF10LQ9HCE6 1279 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 SUPT16HQ9Y5B9 1047 aaKnown RBP16.69■□□□□ 0.26
SEC13-204ENST00000397099 BRCA2P51587 3418 aa16.69■□□□□ 0.26
SEC13-204ENST00000397099 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
SEC13-204ENST00000397099 CDK8P49336 464 aa16.68■□□□□ 0.26
SEC13-204ENST00000397099 HERVK_113P62684 666 aa16.68■□□□□ 0.26
SEC13-204ENST00000397099 IRF5Q13568 498 aa16.68■□□□□ 0.26
SEC13-204ENST00000397099 SLFNL1Q499Z3 407 aa16.68■□□□□ 0.26
SEC13-204ENST00000397099 SLAIN1Q8ND83 568 aa16.68■□□□□ 0.26
SEC13-204ENST00000397099 LPAR1Q92633 364 aa16.68■□□□□ 0.26
SEC13-204ENST00000397099 EMILIN3Q9NT22 766 aa16.68■□□□□ 0.26
SEC13-204ENST00000397099 GABRQQ9UN88 632 aa16.68■□□□□ 0.26
SEC13-204ENST00000397099 MKI67P46013 3256 aaKnown RBP16.67■□□□□ 0.26
SEC13-204ENST00000397099 GSG1L2A8MUP6 293 aa16.67■□□□□ 0.26
SEC13-204ENST00000397099 UBXN2AP68543 259 aa16.67■□□□□ 0.26
SEC13-204ENST00000397099 MTFR1Q15390 333 aa16.67■□□□□ 0.26
SEC13-204ENST00000397099 ZMYM1Q5SVZ6 1142 aa16.67■□□□□ 0.26
SEC13-204ENST00000397099 GPRC5AQ8NFJ5 357 aa16.67■□□□□ 0.26
SEC13-204ENST00000397099 EXOC6Q8TAG9 804 aa16.67■□□□□ 0.26
SEC13-204ENST00000397099 OTUD7AQ8TE49 926 aaPredicted RBP16.67■□□□□ 0.26
SEC13-204ENST00000397099 PXYLP1Q8TE99 480 aa16.67■□□□□ 0.26
SEC13-204ENST00000397099 KANSL2Q9H9L4 492 aa16.67■□□□□ 0.26
SEC13-204ENST00000397099 KIAA0100Q14667 2235 aaKnown RBP16.67■□□□□ 0.26
SEC13-204ENST00000397099 ROBO3Q96MS0 1386 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 ADCY3O60266 1144 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 APPP05067 770 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
SEC13-204ENST00000397099 CYP2D6P10635 497 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 CCL5P13501 91 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 GUCY1A2P33402 732 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 TDO2P48775 406 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 FLT3LGP49771 235 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 CCNA1P78396 465 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 NUCB1Q02818 461 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 SEPT2Q15019 361 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 SHROOM1Q2M3G4 852 aaPredicted RBP16.66■□□□□ 0.26
SEC13-204ENST00000397099 LBX2Q6XYB7 198 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 CHD1LQ86WJ1 897 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
SEC13-204ENST00000397099 RABGAP1Q9Y3P9 1069 aa16.66■□□□□ 0.26
SEC13-204ENST00000397099 SLC34A2O95436 690 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 CHGBP05060 677 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 VCAM1P19320 739 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 MAPK4P31152 587 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 ICA1Q05084 483 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 CATSPERGQ6ZRH7 1159 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 CCAR1Q8IX12 1150 aaKnown RBP16.65■□□□□ 0.26
SEC13-204ENST00000397099 DYNLL2Q96FJ2 89 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 RNF208Q9H0X6 261 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 OSBPL3Q9H4L5 887 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 MKNK2Q9HBH9 465 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 HELLSQ9NRZ9 838 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 HOXC10Q9NYD6 342 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 TMX2Q9Y320 296 aa16.65■□□□□ 0.26
SEC13-204ENST00000397099 PDE4BQ07343 736 aa16.64■□□□□ 0.25
SEC13-204ENST00000397099 PPP4R3BQ5MIZ7 849 aa16.64■□□□□ 0.25
SEC13-204ENST00000397099 IFNL3Q8IZI9 196 aa16.64■□□□□ 0.25
SEC13-204ENST00000397099 SLC44A5Q8NCS7 719 aa16.64■□□□□ 0.25
SEC13-204ENST00000397099 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.25
SEC13-204ENST00000397099 ACER1Q8TDN7 264 aa16.64■□□□□ 0.25
SEC13-204ENST00000397099 SOCS4Q8WXH5 440 aa16.64■□□□□ 0.25
SEC13-204ENST00000397099 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
SEC13-204ENST00000397099 MINDY4BA8MYZ0 360 aa16.63■□□□□ 0.25
SEC13-204ENST00000397099 M0R2C6 588 aa16.63■□□□□ 0.25
SEC13-204ENST00000397099 AKR1B1P15121 316 aa16.63■□□□□ 0.25
SEC13-204ENST00000397099 ELNP15502 786 aa16.63■□□□□ 0.25
SEC13-204ENST00000397099 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
SEC13-204ENST00000397099 ERVK-9P63128 1117 aa16.63■□□□□ 0.25
SEC13-204ENST00000397099 ERVK-24P63145 666 aa16.63■□□□□ 0.25
SEC13-204ENST00000397099 COG2Q14746 738 aa16.63■□□□□ 0.25
SEC13-204ENST00000397099 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms