RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 FAM109BQ6ICB4 259 aaPredicted RBP14.61□□□□□ -0.07
GAPDH-202ENST00000396856 TATDN1Q6P1N9 297 aa14.61□□□□□ -0.07
GAPDH-202ENST00000396856 C7orf61Q8IZ16 206 aa14.61□□□□□ -0.07
GAPDH-202ENST00000396856 ANKRD13CQ8N6S4 541 aa14.61□□□□□ -0.07
GAPDH-202ENST00000396856 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.61□□□□□ -0.073e-13■□□□□ 10.2
GAPDH-202ENST00000396856 BCL11AQ9H165 835 aa14.61□□□□□ -0.07
GAPDH-202ENST00000396856 ASCC2Q9H1I8 757 aaPredicted RBP14.61□□□□□ -0.07
GAPDH-202ENST00000396856 PRDM6Q9NQX0 595 aa14.61□□□□□ -0.07
GAPDH-202ENST00000396856 PAG1Q9NWQ8 432 aa14.61□□□□□ -0.07
GAPDH-202ENST00000396856 ZNF532Q9HCE3 1301 aa14.61□□□□□ -0.07
GAPDH-202ENST00000396856 TNPO2O14787 897 aaKnown RBP14.6□□□□□ -0.07
GAPDH-202ENST00000396856 GDF11O95390 407 aa14.6□□□□□ -0.07
GAPDH-202ENST00000396856 SYN1P17600 705 aa14.6□□□□□ -0.07
GAPDH-202ENST00000396856 HOXA7P31268 230 aaPredicted RBP14.6□□□□□ -0.07
GAPDH-202ENST00000396856 IRX3P78415 501 aaPredicted RBP14.6□□□□□ -0.07
GAPDH-202ENST00000396856 ANKLE1Q8NAG6 615 aa14.6□□□□□ -0.07
GAPDH-202ENST00000396856 COA7Q96BR5 231 aa14.6□□□□□ -0.07
GAPDH-202ENST00000396856 HAUS7Q99871 368 aa14.6□□□□□ -0.07
GAPDH-202ENST00000396856 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
GAPDH-202ENST00000396856 DNAH12Q6ZR08 3092 aa14.59□□□□□ -0.07
GAPDH-202ENST00000396856 TCRBV5S4A2TA0A5A2 114 aa14.59□□□□□ -0.07
GAPDH-202ENST00000396856 GH2P01242 217 aa14.59□□□□□ -0.07
GAPDH-202ENST00000396856 POLR3DP05423 398 aaPredicted RBP14.59□□□□□ -0.07
GAPDH-202ENST00000396856 JAG1P78504 1218 aa14.59□□□□□ -0.07
GAPDH-202ENST00000396856 CERKLQ49MI3 558 aaPredicted RBP14.59□□□□□ -0.07
GAPDH-202ENST00000396856 TAOK2Q9UL54 1235 aa14.59□□□□□ -0.07
GAPDH-202ENST00000396856 RPTORQ8N122 1335 aa14.59□□□□□ -0.07
GAPDH-202ENST00000396856 DOCK3Q8IZD9 2030 aa14.58□□□□□ -0.08
GAPDH-202ENST00000396856 ADD2P35612 726 aa14.58□□□□□ -0.08
GAPDH-202ENST00000396856 ZSCAN25Q6NSZ9 544 aa14.58□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L2Q6R6M4 530 aa14.58□□□□□ -0.08
GAPDH-202ENST00000396856 GTF3C2Q8WUA4 911 aaPredicted RBP14.58□□□□□ -0.08
GAPDH-202ENST00000396856 EDC3Q96F86 508 aaKnown RBP14.58□□□□□ -0.08
GAPDH-202ENST00000396856 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.58□□□□□ -0.082e-6■■■□□ 17.1
GAPDH-202ENST00000396856 CABP5Q9NP86 173 aa14.58□□□□□ -0.08
GAPDH-202ENST00000396856 MCM9Q9NXL9 1143 aa14.58□□□□□ -0.08
GAPDH-202ENST00000396856 TTC28Q96AY4 2481 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 MYH1P12882 1939 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 PLCD1P51178 756 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 ABCB5Q2M3G0 1257 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 SHROOM1Q2M3G4 852 aaPredicted RBP14.57□□□□□ -0.08
GAPDH-202ENST00000396856 LCORLQ8N3X6 602 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 GPATCH3Q96I76 525 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 C12orf42Q96LP6 360 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 FEZ1Q99689 392 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 UBE2OQ9C0C9 1292 aaKnown RBP14.57□□□□□ -0.08
GAPDH-202ENST00000396856 NBPF3Q9H094 633 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 DCTPP1Q9H773 170 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 DCP1AQ9NPI6 582 aaPredicted RBP14.57□□□□□ -0.08
GAPDH-202ENST00000396856 ATP8A2Q9NTI2 1148 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 MORF4L1Q9UBU8 362 aa14.57□□□□□ -0.08
GAPDH-202ENST00000396856 DDX60LQ5H9U9 1706 aaKnown RBP14.56□□□□□ -0.08
GAPDH-202ENST00000396856 SHMT1P34896 483 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 USP14P54578 494 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 GABPAQ06546 454 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 RAB3GAP1Q15042 981 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 UBE3CQ15386 1083 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 DDRGK1Q96HY6 314 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 KIAA1683Q9H0B3 1180 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 ECHDC1Q9NTX5 307 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 GJD2Q9UKL4 321 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 OGDHLQ9ULD0 1010 aa14.56□□□□□ -0.08
GAPDH-202ENST00000396856 SMARCA5O60264 1052 aaPredicted RBP14.55□□□□□ -0.08
GAPDH-202ENST00000396856 HERVK_113P62684 666 aa14.55□□□□□ -0.08
GAPDH-202ENST00000396856 TRIM32Q13049 653 aa14.55□□□□□ -0.08
GAPDH-202ENST00000396856 AMOTL1Q8IY63 956 aa14.55□□□□□ -0.08
GAPDH-202ENST00000396856 GPRC5AQ8NFJ5 357 aa14.55□□□□□ -0.08
GAPDH-202ENST00000396856 SDR42E1Q8WUS8 393 aa14.55□□□□□ -0.08
GAPDH-202ENST00000396856 P2RX7Q99572 595 aaKnown RBP14.55□□□□□ -0.08
GAPDH-202ENST00000396856 ARMT1Q9H993 441 aa14.55□□□□□ -0.08
GAPDH-202ENST00000396856 EMILIN3Q9NT22 766 aa14.55□□□□□ -0.08
GAPDH-202ENST00000396856 SWAP70Q9UH65 585 aa14.55□□□□□ -0.08
GAPDH-202ENST00000396856 PFASO15067 1338 aa14.55□□□□□ -0.08
GAPDH-202ENST00000396856 MBD4O95243 580 aa14.54□□□□□ -0.08
GAPDH-202ENST00000396856 COL6A1P12109 1028 aa14.54□□□□□ -0.08
GAPDH-202ENST00000396856 C11orf49Q9H6J7 331 aa14.54□□□□□ -0.08
GAPDH-202ENST00000396856 NAV1Q8NEY1 1877 aa14.54□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L15C9J2P7 530 aa14.53□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L13C9JLJ4 530 aa14.53□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L11C9JVI0 530 aa14.53□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L18D6R9N7 530 aa14.53□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L22D6RA61 530 aa14.53□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L17D6RBQ6 530 aa14.53□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L19D6RCP7 530 aa14.53□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L20D6RJB6 530 aa14.53□□□□□ -0.08
GAPDH-202ENST00000396856 USP17L24Q0WX57 530 aa14.53□□□□□ -0.08
GAPDH-202ENST00000396856 ZYXQ15942 572 aaKnown RBP14.53□□□□□ -0.08
GAPDH-202ENST00000396856 MPHOSPH10O00566 681 aaKnown RBP14.52□□□□□ -0.09
GAPDH-202ENST00000396856 HMGCRP04035 888 aa14.52□□□□□ -0.09
GAPDH-202ENST00000396856 VCAM1P19320 739 aa14.52□□□□□ -0.09
GAPDH-202ENST00000396856 MAPK4P31152 587 aa14.52□□□□□ -0.09
GAPDH-202ENST00000396856 RRP1P56182 461 aaKnown RBP14.52□□□□□ -0.09
GAPDH-202ENST00000396856 ERVK-9P63128 1117 aa14.52□□□□□ -0.09
GAPDH-202ENST00000396856 ERVK-24P63145 666 aa14.52□□□□□ -0.09
GAPDH-202ENST00000396856 TMEM179Q6ZVK1 233 aa14.52□□□□□ -0.09
GAPDH-202ENST00000396856 CCAR1Q8IX12 1150 aaKnown RBP14.52□□□□□ -0.09
GAPDH-202ENST00000396856 SOCS4Q8WXH5 440 aa14.52□□□□□ -0.09
GAPDH-202ENST00000396856 RBPJLQ9UBG7 517 aa14.52□□□□□ -0.09
GAPDH-202ENST00000396856 PRKAB2O43741 272 aa14.51□□□□□ -0.09
GAPDH-202ENST00000396856 GUCY1A2P33402 732 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms