RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 INTS4Q96HW7 963 aaKnown RBP17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 ZSCAN10Q96SZ4 725 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 TNKSO95271 1327 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 OTOFQ9HC10 1997 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 IFIT3O14879 490 aaKnown RBP17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 LIFRP42702 1097 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 SEC23AQ15436 765 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 ZSCAN23Q3MJ62 389 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 CCDC178Q5BJE1 867 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 TRIM44Q96DX7 344 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 ZKSCAN3Q9BRR0 538 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 IL17RBQ9NRM6 502 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 IGKV6D-41A0A0C4DH26 115 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 ERICH2A1L162 156 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 EVCP57679 992 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 FGD1P98174 961 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 TMEM67Q5HYA8 995 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 PRAMEF18Q5VWM3 479 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 CAVIN1Q6NZI2 390 aaKnown RBP17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 SGMS1Q86VZ5 419 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 BRF1Q92994 677 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 LY9Q9HBG7 655 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
TM9SF1-202ENST00000396854 PHF20L1A8MW92 1017 aa17.33■□□□□ 0.37
TM9SF1-202ENST00000396854 NOVP48745 357 aa17.33■□□□□ 0.37
TM9SF1-202ENST00000396854 RRP1BQ14684 758 aaKnown RBP17.33■□□□□ 0.37
TM9SF1-202ENST00000396854 USP48Q86UV5 1035 aa17.33■□□□□ 0.37
TM9SF1-202ENST00000396854 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.37
TM9SF1-202ENST00000396854 GPHNQ9NQX3 736 aaPredicted RBP17.33■□□□□ 0.37
TM9SF1-202ENST00000396854 NMT2O60551 498 aa17.33■□□□□ 0.36
TM9SF1-202ENST00000396854 BRD1O95696 1058 aa17.33■□□□□ 0.36
TM9SF1-202ENST00000396854 WTAPQ15007 396 aa17.33■□□□□ 0.36
TM9SF1-202ENST00000396854 DGKHQ86XP1 1220 aa17.33■□□□□ 0.36
TM9SF1-202ENST00000396854 ANKS1AQ92625 1134 aa17.33■□□□□ 0.36
TM9SF1-202ENST00000396854 ZNF341Q9BYN7 854 aa17.33■□□□□ 0.36
TM9SF1-202ENST00000396854 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.36
TM9SF1-202ENST00000396854 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.36
TM9SF1-202ENST00000396854 PRPF40AO75400 957 aaKnown RBP17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 ABCB5Q2M3G0 1257 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 RCSD1Q6JBY9 416 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 TMEM179Q6ZVK1 233 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 TMTC2Q8N394 836 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 GPT2Q8TD30 523 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 CDCA5Q96FF9 252 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 CAP2P40123 477 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 CEP95Q96GE4 821 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 TPCN1Q9ULQ1 816 aa17.32■□□□□ 0.36
TM9SF1-202ENST00000396854 TRPM7Q96QT4 1865 aa17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 MPHOSPH10O00566 681 aaKnown RBP17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 GDF11O95390 407 aa17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 APOBRQ0VD83 1088 aa17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 PPP4R3BQ5MIZ7 849 aa17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 MAP1SQ66K74 1059 aaPredicted RBP17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 DLK2Q6UY11 383 aa17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 SENP2Q9HC62 589 aa17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 GINM1Q9NU53 330 aa17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 MTMR4Q9NYA4 1195 aa17.31■□□□□ 0.36
TM9SF1-202ENST00000396854 PHIPQ8WWQ0 1821 aa17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 GUCY1A2P33402 732 aa17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 SHROOM1Q2M3G4 852 aaPredicted RBP17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 IFIT1BQ5T764 474 aaKnown RBP17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 ANP32BQ92688 251 aaKnown RBP17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 ZSCAN31Q96LW9 406 aaPredicted RBP17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 LARP6Q9BRS8 491 aaKnown RBP17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 CABP5Q9NP86 173 aa17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 CTNND1O60716 968 aaKnown RBP17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 GH2P01242 217 aa17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 NF2P35240 595 aa17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 JAG1P78504 1218 aa17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 KLRG1Q96E93 195 aa17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 ZNF274Q96GC6 653 aaPredicted RBP17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 KANSL2Q9H9L4 492 aa17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 SH2B1Q9NRF2 756 aaPredicted RBP17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
TM9SF1-202ENST00000396854 CCDC69A6NI79 296 aa17.29■□□□□ 0.36
TM9SF1-202ENST00000396854 ME3Q16798 604 aa17.29■□□□□ 0.36
TM9SF1-202ENST00000396854 GPBP1L1Q9HC44 474 aaPredicted RBP17.29■□□□□ 0.36
TM9SF1-202ENST00000396854 NID2Q14112 1375 aa17.29■□□□□ 0.36
TM9SF1-202ENST00000396854 KLF18A0A0U1RQI7 1052 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 USP2O75604 605 aaPredicted RBP17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 TTLL1O95922 423 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 MBD3O95983 291 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 ASNSP08243 561 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 RCAN1P53805 252 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 APOA5Q6Q788 366 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 STX8Q9UNK0 236 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 PPP1R12BO60237 982 aaPredicted RBP17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 LARGE1O95461 756 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 SEPT2Q15019 361 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 NFXL1Q6ZNB6 911 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 WRNIP1Q96S55 665 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 NYAP2Q9P242 653 aa17.28■□□□□ 0.36
TM9SF1-202ENST00000396854 TOP1P11387 765 aaKnown RBP17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 PDIA3P30101 505 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms