RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 USP17L20D6RJB6 530 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 PLCG2P16885 1265 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 CNGA1P29973 690 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 USP17L24Q0WX57 530 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 GRB14Q14449 540 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 LBX2Q6XYB7 198 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 BADQ92934 168 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 NEUROD6Q96NK8 337 aa10.4□□□□□ -0.75
SCFD1-202ENST00000396629 NOL10Q9BSC4 688 aaKnown RBP10.4□□□□□ -0.75
SCFD1-202ENST00000396629 FLT1P17948 1338 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 BAG3O95817 575 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 CYBAP13498 195 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 FOSL2P15408 326 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 MCAMP43121 646 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 GJC2Q5T442 439 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-202ENST00000396629 CATSPERGQ6ZRH7 1159 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 MAPKAPK5Q8IW41 473 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 CRACR2BQ8N4Y2 399 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-202ENST00000396629 ARRDC4Q8NCT1 418 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 TGFBRAP1Q8WUH2 860 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 AATFQ9NY61 560 aaKnown RBP eCLIP10.39□□□□□ -0.75
SCFD1-202ENST00000396629 NDUFB9Q9Y6M9 179 aa10.39□□□□□ -0.75
SCFD1-202ENST00000396629 CYP2C19P33261 490 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 TRIM34Q9BYJ4 488 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 PDLIM7Q9NR12 457 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 BTBD7Q9P203 1132 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 LRP2BPQ9P2M1 347 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 PALD1Q9ULE6 856 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 ZNFX1Q9P2E3 1918 aaKnown RBP10.38□□□□□ -0.75
SCFD1-202ENST00000396629 VCANP13611 3396 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 PRUNE2Q8WUY3 3088 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 TRIM43BA6NCK2 446 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 E9PSI1 815 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 UQCRFS1P1P0C7P4 283 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 COL9A1P20849 921 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 MTX1Q13505 466 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 GORABQ5T7V8 394 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 C1orf53Q5VUE5 145 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 OLFML2BQ68BL8 750 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 NAA16Q6N069 864 aaPredicted RBP10.38□□□□□ -0.75
SCFD1-202ENST00000396629 TRIM43Q96BQ3 446 aaPredicted RBP10.38□□□□□ -0.75
SCFD1-202ENST00000396629 MEIS3Q99687 375 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 IVNS1ABPQ9Y6Y0 642 aa10.38□□□□□ -0.75
SCFD1-202ENST00000396629 KBTBD13C9JR72 458 aa10.37□□□□□ -0.75
SCFD1-202ENST00000396629 GH2P01242 217 aa10.37□□□□□ -0.75
SCFD1-202ENST00000396629 USP14P54578 494 aa10.37□□□□□ -0.75
SCFD1-202ENST00000396629 TRIM60Q495X7 471 aa10.37□□□□□ -0.75
SCFD1-202ENST00000396629 TJAP1Q5JTD0 557 aa10.37□□□□□ -0.75
SCFD1-202ENST00000396629 WDR78Q5VTH9 848 aa10.37□□□□□ -0.75
SCFD1-202ENST00000396629 SH3RF1Q7Z6J0 888 aa10.37□□□□□ -0.75
SCFD1-202ENST00000396629 KIAA1683Q9H0B3 1180 aa10.37□□□□□ -0.75
SCFD1-202ENST00000396629 PRDM5Q9NQX1 630 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-202ENST00000396629 SMC4Q9NTJ3 1288 aa10.37□□□□□ -0.75
SCFD1-202ENST00000396629 A0A0G2JMZ2 1700 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 TNFRSF10AO00220 468 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 SEPT4O43236 478 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 SRGAP3O43295 1099 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 IGSF3O75054 1194 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 HLA-DOAP06340 250 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 SLFN5Q08AF3 891 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 TATDN1Q6P1N9 297 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 ATF7IPQ6VMQ6 1270 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 ADGRA1Q86SQ6 560 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 FAM9BQ8IZU0 186 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 SMCHD1A6NHR9 2005 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 SPDYE16A6NNV3 312 aaPredicted RBP10.36□□□□□ -0.75
SCFD1-202ENST00000396629 VCAM1P19320 739 aa10.36□□□□□ -0.75
SCFD1-202ENST00000396629 ZYXQ15942 572 aaKnown RBP10.36□□□□□ -0.75
SCFD1-202ENST00000396629 API5Q9BZZ5 524 aaKnown RBP10.36□□□□□ -0.75
SCFD1-202ENST00000396629 SAP30BPQ9UHR5 308 aaKnown RBP10.36□□□□□ -0.75
SCFD1-202ENST00000396629 NOB1Q9ULX3 412 aaKnown RBP10.36□□□□□ -0.75
SCFD1-202ENST00000396629 ANP32CO43423 234 aa10.35□□□□□ -0.75
SCFD1-202ENST00000396629 STRNO43815 780 aa10.35□□□□□ -0.75
SCFD1-202ENST00000396629 ADCYAP1R1P41586 468 aa10.35□□□□□ -0.75
SCFD1-202ENST00000396629 LRRC41Q15345 812 aa10.35□□□□□ -0.75
SCFD1-202ENST00000396629 DPP9Q86TI2 863 aa10.35□□□□□ -0.75
SCFD1-202ENST00000396629 USP38Q8NB14 1042 aa10.35□□□□□ -0.75
SCFD1-202ENST00000396629 FEZ1Q99689 392 aa10.35□□□□□ -0.75
SCFD1-202ENST00000396629 GNAI3P08754 354 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 ITGB8P26012 769 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 ADORA2AP29274 412 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 EPHB4P54760 987 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 TLE2Q04725 743 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 GRIN2CQ14957 1233 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 ANO1Q5XXA6 986 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 ACER1Q8TDN7 264 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 RNPC3Q96LT9 517 aaKnown RBP10.34□□□□□ -0.75
SCFD1-202ENST00000396629 TACC3Q9Y6A5 838 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 KIAA0355O15063 1070 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 COBLO75128 1261 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 CYP2E1P05181 493 aaPredicted RBP10.34□□□□□ -0.75
SCFD1-202ENST00000396629 DYNLL1P63167 89 aaKnown RBP10.34□□□□□ -0.75
SCFD1-202ENST00000396629 SHCBP1Q8NEM2 672 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 MOV10L1Q9BXT6 1211 aaKnown RBP10.34□□□□□ -0.75
SCFD1-202ENST00000396629 EHD4Q9H223 541 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 RPAP3Q9H6T3 665 aaPredicted RBP10.34□□□□□ -0.75
SCFD1-202ENST00000396629 SNRKQ9NRH2 765 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 PHF24Q9UPV7 400 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 TTC28Q96AY4 2481 aa10.34□□□□□ -0.75
SCFD1-202ENST00000396629 PARP14Q460N5 1801 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms