RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 RAG1P15918 1043 aa6.75□□□□□ -1.33
CMC1-202ENST00000396610 GRIK1P39086 918 aa6.75□□□□□ -1.33
CMC1-202ENST00000396610 CD97P48960 835 aa6.75□□□□□ -1.33
CMC1-202ENST00000396610 COL9A2Q14055 689 aaPredicted RBP6.75□□□□□ -1.33
CMC1-202ENST00000396610 MSMPQ1L6U9 139 aa6.75□□□□□ -1.33
CMC1-202ENST00000396610 NLRC3Q7RTR2 1065 aa6.75□□□□□ -1.33
CMC1-202ENST00000396610 ATG4CQ96DT6 458 aa6.75□□□□□ -1.33
CMC1-202ENST00000396610 KIF2CQ99661 725 aa6.75□□□□□ -1.33
CMC1-202ENST00000396610 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
CMC1-202ENST00000396610 MAPK8IP1Q9UQF2 711 aa6.75□□□□□ -1.33
CMC1-202ENST00000396610 PRR33A8MZF0 331 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 COBLO75128 1261 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 CEACAM5P06731 702 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 IMPDH2P12268 514 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 ETV3P41162 512 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 OXCT1P55809 520 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 CDCP2Q5VXM1 449 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 ARHGAP27Q6ZUM4 889 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 LSRQ86X29 649 aaPredicted RBP6.74□□□□□ -1.33
CMC1-202ENST00000396610 PLD6Q8N2A8 252 aaKnown RBP6.74□□□□□ -1.33
CMC1-202ENST00000396610 KRTAP4-12Q9BQ66 201 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 CNNM2Q9H8M5 875 aa6.74□□□□□ -1.33
CMC1-202ENST00000396610 ZC3H7BQ9UGR2 993 aaKnown RBP6.74□□□□□ -1.33
CMC1-202ENST00000396610 FAM86C2PA6NEL3 165 aa6.73□□□□□ -1.33
CMC1-202ENST00000396610 UBOX5O94941 541 aa6.73□□□□□ -1.33
CMC1-202ENST00000396610 NME1P15531 152 aaKnown RBP6.73□□□□□ -1.33
CMC1-202ENST00000396610 ATF4P18848 351 aaPredicted RBP6.73□□□□□ -1.33
CMC1-202ENST00000396610 SPINK2P20155 84 aa6.73□□□□□ -1.33
CMC1-202ENST00000396610 ZC3H6P61129 1189 aaKnown RBP6.73□□□□□ -1.33
CMC1-202ENST00000396610 GNL2Q13823 731 aaKnown RBP6.73□□□□□ -1.33
CMC1-202ENST00000396610 LRRFIP1Q32MZ4 808 aaKnown RBP6.73□□□□□ -1.33
CMC1-202ENST00000396610 SFRP5Q5T4F7 317 aa6.73□□□□□ -1.33
CMC1-202ENST00000396610 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
CMC1-202ENST00000396610 ZNF746Q6NUN9 644 aaPredicted RBP6.73□□□□□ -1.33
CMC1-202ENST00000396610 SEC16BQ96JE7 1060 aa6.73□□□□□ -1.33
CMC1-202ENST00000396610 CCDC74BQ96LY2 380 aa6.73□□□□□ -1.33
CMC1-202ENST00000396610 SRRTQ9BXP5 876 aaKnown RBP6.73□□□□□ -1.33
CMC1-202ENST00000396610 GNAT3A8MTJ3 354 aa6.72□□□□□ -1.33
CMC1-202ENST00000396610 KIAA1324LA8MWY0 1029 aaPredicted RBP6.72□□□□□ -1.33
CMC1-202ENST00000396610 IGF2BP3O00425 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
CMC1-202ENST00000396610 RGS13O14921 159 aa6.72□□□□□ -1.33
CMC1-202ENST00000396610 INTS5Q6P9B9 1019 aaKnown RBP6.72□□□□□ -1.33
CMC1-202ENST00000396610 RUFY4Q6ZNE9 571 aa6.72□□□□□ -1.33
CMC1-202ENST00000396610 PLAGL2Q9UPG8 496 aa6.72□□□□□ -1.33
CMC1-202ENST00000396610 CEP131Q9UPN4 1083 aa6.72□□□□□ -1.33
CMC1-202ENST00000396610 TNFRSF10CO14798 259 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 CBX7O95931 251 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 FGRP09769 529 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 ZNF865P0CJ78 1059 aaPredicted RBP6.71□□□□□ -1.34
CMC1-202ENST00000396610 ACRP10323 421 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 DNAJA1P31689 397 aaKnown RBP6.71□□□□□ -1.34
CMC1-202ENST00000396610 GBP1P32455 592 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 EIF6P56537 245 aaKnown RBP6.71□□□□□ -1.34
CMC1-202ENST00000396610 NAALADL2Q58DX5 795 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 C22orf34Q6ZV56 151 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 SPACA3Q8IXA5 215 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 MFSD4AQ8N468 514 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 RBBP8NLQ8NC74 664 aaPredicted RBP6.71□□□□□ -1.34
CMC1-202ENST00000396610 NETO1Q8TDF5 533 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 SHDQ96IW2 340 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 KREMEN1Q96MU8 473 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 SLC9A7Q96T83 725 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 PCMTD2Q9NV79 361 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 CAPN6Q9Y6Q1 641 aa6.71□□□□□ -1.34
CMC1-202ENST00000396610 COL17A1Q9UMD9 1497 aaPredicted RBP6.71□□□□□ -1.34
CMC1-202ENST00000396610 GIPRP48546 466 aa6.7□□□□□ -1.34
CMC1-202ENST00000396610 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
CMC1-202ENST00000396610 DTX1Q86Y01 620 aa6.7□□□□□ -1.34
CMC1-202ENST00000396610 RNF141Q8WVD5 230 aa6.7□□□□□ -1.34
CMC1-202ENST00000396610 Q96M66 194 aa6.7□□□□□ -1.34
CMC1-202ENST00000396610 CRBNQ96SW2 442 aa6.7□□□□□ -1.34
CMC1-202ENST00000396610 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.7□□□□□ -1.34
CMC1-202ENST00000396610 MKNK2Q9HBH9 465 aa6.7□□□□□ -1.34
CMC1-202ENST00000396610 STRIP2Q9ULQ0 834 aa6.7□□□□□ -1.34
CMC1-202ENST00000396610 FAM155AB1AL88 458 aaPredicted RBP6.69□□□□□ -1.34
CMC1-202ENST00000396610 CYP7A1P22680 504 aa6.69□□□□□ -1.34
CMC1-202ENST00000396610 GUCY2CP25092 1073 aa6.69□□□□□ -1.34
CMC1-202ENST00000396610 ARID5AQ03989 594 aa6.69□□□□□ -1.34
CMC1-202ENST00000396610 ZYXQ15942 572 aaKnown RBP6.69□□□□□ -1.34
CMC1-202ENST00000396610 IFI16Q16666 785 aaKnown RBP6.69□□□□□ -1.34
CMC1-202ENST00000396610 VPS37DQ86XT2 251 aa6.69□□□□□ -1.34
CMC1-202ENST00000396610 TAB3Q8N5C8 712 aaPredicted RBP6.69□□□□□ -1.34
CMC1-202ENST00000396610 FAM169BQ8N8A8 192 aa6.69□□□□□ -1.34
CMC1-202ENST00000396610 ANAPC16Q96DE5 110 aa6.69□□□□□ -1.34
CMC1-202ENST00000396610 ZNF512BQ96KM6 892 aaPredicted RBP6.69□□□□□ -1.34
CMC1-202ENST00000396610 SLC6A18Q96N87 628 aa6.69□□□□□ -1.34
CMC1-202ENST00000396610 TM9SF2Q99805 663 aa6.69□□□□□ -1.34
CMC1-202ENST00000396610 TNKS2Q9H2K2 1166 aa6.69□□□□□ -1.34
CMC1-202ENST00000396610 LRRN2O75325 713 aa6.68□□□□□ -1.34
CMC1-202ENST00000396610 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
CMC1-202ENST00000396610 KIR3DL1P43629 444 aa6.68□□□□□ -1.34
CMC1-202ENST00000396610 TNK2Q07912 1038 aa6.68□□□□□ -1.34
CMC1-202ENST00000396610 VSIG10LQ86VR7 867 aa6.68□□□□□ -1.34
CMC1-202ENST00000396610 MCF2L2Q86YR7 1114 aa6.68□□□□□ -1.34
CMC1-202ENST00000396610 TMEM192Q8IY95 271 aa6.68□□□□□ -1.34
CMC1-202ENST00000396610 DTWD2Q8NBA8 298 aa6.68□□□□□ -1.34
CMC1-202ENST00000396610 SLC43A3Q8NBI5 491 aa6.68□□□□□ -1.34
CMC1-202ENST00000396610 COX4I2Q96KJ9 171 aa6.68□□□□□ -1.34
CMC1-202ENST00000396610 C8orf37Q96NL8 207 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms