RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 POLR3GO15318 223 aaPredicted RBP15.18■□□□□ 0.02
TRIM40-207ENST00000396581 POLR2DO15514 142 aaKnown RBP15.18■□□□□ 0.02
TRIM40-207ENST00000396581 CCDC175P0C221 793 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 CDK11BP21127 795 aaKnown RBP15.18■□□□□ 0.02
TRIM40-207ENST00000396581 TMEM67Q5HYA8 995 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 PDILTQ8N807 584 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 MTA3Q9BTC8 594 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 RAB21Q9UL25 225 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 BCORQ6W2J9 1755 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 ZNF532Q9HCE3 1301 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 UBE2Q2LH0YL09 131 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 PDE6AP16499 860 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 USP5P45974 858 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 RCAN1P53805 252 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 TUBB4BP68371 445 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 ST5P78524 1137 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 SPECC1Q5M775 1068 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 SRGAP1Q7Z6B7 1085 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 DIS3L2Q8IYB7 885 aaKnown RBP15.17■□□□□ 0.02
TRIM40-207ENST00000396581 SLC26A6Q9BXS9 759 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 SAMSN1Q9NSI8 373 aaKnown RBP15.17■□□□□ 0.02
TRIM40-207ENST00000396581 LRRC4BQ9NT99 713 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 ZSWIM5Q9P217 1185 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 ADGRG1Q9Y653 693 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 SLC12A7Q9Y666 1083 aa15.17■□□□□ 0.02
TRIM40-207ENST00000396581 CAPN2P17655 700 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 SAFBQ15424 915 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRIM40-207ENST00000396581 LONRF2Q1L5Z9 754 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 METTL24Q5JXM2 366 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 NFXL1Q6ZNB6 911 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 MSANTD4Q8NCY6 345 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 EXOC4Q96A65 974 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 RTL9Q8NET4 1388 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 PATL2C9JE40 543 aaKnown RBP15.16■□□□□ 0.02
TRIM40-207ENST00000396581 SEMA3EO15041 775 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 GUCY1A2P33402 732 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 GPS2Q13227 327 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 SMIM5Q71RC9 77 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 RASGRP2Q7LDG7 609 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 SH3RF1Q7Z6J0 888 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 AMIGO3Q86WK7 504 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 TRMT44Q8IYL2 757 aaKnown RBP15.16■□□□□ 0.02
TRIM40-207ENST00000396581 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
TRIM40-207ENST00000396581 ARHGEF1Q92888 912 aaKnown RBP15.16■□□□□ 0.02
TRIM40-207ENST00000396581 MYL10Q9BUA6 226 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 TSPYL1Q9H0U9 437 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 CNNM2Q9H8M5 875 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 EPB41L4AQ9HCS5 686 aaPredicted RBP15.16■□□□□ 0.02
TRIM40-207ENST00000396581 TACC3Q9Y6A5 838 aa15.16■□□□□ 0.02
TRIM40-207ENST00000396581 TAF1LQ8IZX4 1826 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 POTEB2H3BUK9 544 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 ZPR1O75312 459 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
TRIM40-207ENST00000396581 MTF1Q14872 753 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 CCDC152Q4G0S7 254 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 HSP90AA4PQ58FG1 418 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 CDKAL1Q5VV42 579 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 SPATA1Q5VX52 437 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 RAD9BQ6WBX8 426 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 CEP112Q8N8E3 955 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 NEK11Q8NG66 645 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 DESI2Q9BSY9 194 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 ANKZF1Q9H8Y5 726 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 ZCCHC17Q9NP64 241 aaKnown RBP15.15■□□□□ 0.02
TRIM40-207ENST00000396581 ADD3Q9UEY8 706 aaKnown RBP15.15■□□□□ 0.02
TRIM40-207ENST00000396581 CDC23Q9UJX2 597 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 CEP131Q9UPN4 1083 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 LRP5O75197 1615 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 SOWAHDA6NJG2 315 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 ZBTB22O15209 634 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 APPP05067 770 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 CHMP4BP1P59074 171 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 CUL4BQ13620 913 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 ZNF827Q17R98 1081 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 SLC27A3Q5K4L6 730 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 TBC1D9BQ66K14 1250 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 KRT23Q9C075 422 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 SEC31BQ9NQW1 1179 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 CNNM1Q9NRU3 951 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 AATFQ9NY61 560 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRIM40-207ENST00000396581 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 MYO5AQ9Y4I1 1855 aaKnown RBP15.15■□□□□ 0.02
TRIM40-207ENST00000396581 PCDHB6Q9Y5E3 794 aa15.15■□□□□ 0.02
TRIM40-207ENST00000396581 ITIH6Q6UXX5 1313 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 ARAP2Q8WZ64 1704 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 IFIT3O14879 490 aaKnown RBP15.14■□□□□ 0.01
TRIM40-207ENST00000396581 DEXIO95424 95 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 UQCRFS1P1P0C7P4 283 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 RAD51AP2Q09MP3 1159 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 KARSQ15046 597 aaKnown RBP15.14■□□□□ 0.01
TRIM40-207ENST00000396581 SLC10A5Q5PT55 438 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 BEND6Q5SZJ8 279 aaPredicted RBP15.14■□□□□ 0.01
TRIM40-207ENST00000396581 IFNL3Q8IZI9 196 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 IQUBQ8NA54 791 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 SRP68Q9UHB9 627 aaKnown RBP15.14■□□□□ 0.01
TRIM40-207ENST00000396581 BRWD3Q6RI45 1802 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 DOCK2Q92608 1830 aa15.14■□□□□ 0.01
TRIM40-207ENST00000396581 TEX33O43247 280 aa15.13■□□□□ 0.01
TRIM40-207ENST00000396581 IDH1O75874 414 aaKnown RBP15.13■□□□□ 0.01
TRIM40-207ENST00000396581 TRIM37O94972 964 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms