RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 ENOX1Q8TC92 643 aaKnown RBP18.27■□□□□ 0.52
CCHCR1-202ENST00000396263 SMARCE1Q969G3 411 aa18.27■□□□□ 0.52
CCHCR1-202ENST00000396263 INTS13Q9NVM9 706 aa18.27■□□□□ 0.52
CCHCR1-202ENST00000396263 COL1A1P02452 1464 aaPredicted RBP18.27■□□□□ 0.52
CCHCR1-202ENST00000396263 TMEM232C9JQI7 657 aa18.27■□□□□ 0.51
CCHCR1-202ENST00000396263 GNPATO15228 680 aa18.27■□□□□ 0.51
CCHCR1-202ENST00000396263 PRR29P0C7W0 189 aa18.27■□□□□ 0.51
CCHCR1-202ENST00000396263 FAM196AQ6ZSG2 479 aa18.27■□□□□ 0.51
CCHCR1-202ENST00000396263 SPATA20Q8TB22 786 aa18.27■□□□□ 0.51
CCHCR1-202ENST00000396263 XBP1P17861 261 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 UBE4AQ14139 1066 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 CABP5Q9NP86 173 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 RAI14Q9P0K7 980 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 ABCF2Q9UG63 623 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 BAZ2AQ9UIF9 1905 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 PHLPP2Q6ZVD8 1323 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 RPS6KA4O75676 772 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 ETF1P62495 437 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 FUT2Q10981 343 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 TBX2Q13207 712 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 PKN1Q16512 942 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 ENAHQ8N8S7 591 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 ZSCAN10Q96SZ4 725 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 BRIP1Q9BX63 1249 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 IQSEC3Q9UPP2 1182 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 ZNF652Q9Y2D9 606 aa18.26■□□□□ 0.51
CCHCR1-202ENST00000396263 TRIM37O94972 964 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 FGRP09769 529 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 PCP11498 1178 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 AKAP17AQ02040 695 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 FMR1Q06787 632 aaKnown RBP eCLIP18.25■□□□□ 0.516e-7■■□□□ 13.9
CCHCR1-202ENST00000396263 PLCD3Q8N3E9 789 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 CSRNP2Q9H175 543 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 PRPF3O43395 683 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 CDK11BP21127 795 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 GYG1P46976 350 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 TERF2Q15554 542 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 TMEM139Q8IV31 216 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 PHF20Q9BVI0 1012 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 SRP68Q9UHB9 627 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 NFE2L3Q9Y4A8 694 aa18.25■□□□□ 0.51
CCHCR1-202ENST00000396263 TRIM75PA6NK02 468 aa18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 ARHGAP6O43182 974 aa18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 SF3B3Q15393 1217 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 ELF2Q15723 593 aa18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 KMT5BQ4FZB7 885 aa18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 CLEC4GQ6UXB4 293 aa18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 ANKRD18AQ8IVF6 992 aa18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 KRT2P35908 639 aa18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 CT47A1Q5JQC4 288 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 HOMER1Q86YM7 354 aa18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 BSDC1Q9NW68 430 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 V9GYY5 206 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-202ENST00000396263 ERCC5P28715 1186 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 IFIT1BQ5T764 474 aaKnown RBP18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 TRIM65Q6PJ69 517 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 USP49Q70CQ1 688 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 CATIPQ7Z7H3 387 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 REXO1L1PQ8IX06 675 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 VPS54Q9P1Q0 977 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 SMIM22K7EJ46 135 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 ZSCAN12O43309 604 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 BMP15O95972 392 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 PLCD1P51178 756 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 CAVIN4Q5BKX8 364 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 GRAMD1CQ8IYS0 662 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 CCDC34Q96HJ3 373 aa18.23■□□□□ 0.51
CCHCR1-202ENST00000396263 TAF1P21675 1872 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 UBR3Q6ZT12 1888 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 CALM1P0DP23 149 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 CALM2P0DP24 149 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 CALM3P0DP25 149 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 ATP2B1P20020 1258 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 TROAPQ12815 778 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 ZNF827Q17R98 1081 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 SPECC1LQ69YQ0 1117 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 IQCA1Q86XH1 822 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 PDILTQ8N807 584 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 MED15Q96RN5 788 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 DYNLL1P63167 89 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 FBXO38Q6PIJ6 1188 aa18.22■□□□□ 0.51
CCHCR1-202ENST00000396263 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.22■□□□□ 0.516e-8■□□□□ 9.4
CCHCR1-202ENST00000396263 COL24A1Q17RW2 1714 aa18.21■□□□□ 0.51
CCHCR1-202ENST00000396263 DDAH1O94760 285 aa18.21■□□□□ 0.51
CCHCR1-202ENST00000396263 ERFEQ4G0M1 354 aa18.21■□□□□ 0.51
CCHCR1-202ENST00000396263 TBC1D9BQ66K14 1250 aa18.21■□□□□ 0.51
CCHCR1-202ENST00000396263 SH3RF1Q7Z6J0 888 aa18.21■□□□□ 0.51
CCHCR1-202ENST00000396263 ZNF384Q8TF68 577 aa18.21■□□□□ 0.51
CCHCR1-202ENST00000396263 FERMT2Q96AC1 680 aa18.21■□□□□ 0.51
CCHCR1-202ENST00000396263 FAM84BQ96KN1 310 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-202ENST00000396263 FAM205CA6NFA0 338 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms