RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PPIP5K2O43314 1243 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TBCAO75347 108 aaKnown RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 ZNF202O95125 648 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 SBK1Q52WX2 424 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 NUP58Q9BVL2 599 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 RCOR1Q9UKL0 485 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 ATP6V0A2Q9Y487 856 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 URB1O60287 2271 aaKnown RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 BCAMP50895 628 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 NONOQ15233 471 aaKnown RBP eCLIP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 PICK1Q9NRD5 415 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TFIP11Q9UBB9 837 aaKnown RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 SALL3Q9BXA9 1300 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 ORC4O43929 436 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 CYP2E1P05181 493 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TUBB2AQ13885 445 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 SUPT20HL1Q3ZLR7 823 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 BRDTQ58F21 947 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 GOLGA5Q8TBA6 731 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TUBB2BQ9BVA1 445 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TERF1P54274 439 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 CACNA2D4Q7Z3S7 1137 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 EXOC8Q8IYI6 725 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 NECAB1Q8N987 351 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 OSBP2Q969R2 916 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 ARMT1Q9H993 441 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 CLIP2Q9UDT6 1046 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 MTMR6Q9Y217 621 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 BAZ2AQ9UIF9 1905 aaKnown RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 SALL1Q9NSC2 1324 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 ANKRD36CQ5JPF3 1778 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 APBB1IPQ7Z5R6 666 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 ARHGEF1Q92888 912 aaKnown RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 FAM163AQ96GL9 167 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 LARSQ9P2J5 1176 aaKnown RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 SLC26A4O43511 780 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 PPP4CP60510 307 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 SPA17Q15506 151 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 NOM1Q5C9Z4 860 aaKnown RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TMEM179Q6ZVK1 233 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 FILIP1Q7Z7B0 1213 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 JARID2Q92833 1246 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TCEANC2Q96MN5 208 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TPCN1Q9ULQ1 816 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 PPEF1O14829 653 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TRIM37O94972 964 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 GYG1P46976 350 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 RFX5P48382 616 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 UBASH3AP57075 661 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 SERPINA10Q9UK55 444 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 H0YCG3 227 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 TEX35Q5T0J7 233 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 CD209Q9NNX6 404 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 ZBTB22O15209 634 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 SMTNP53814 917 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 GTF2IP78347 998 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 KRT83P78385 493 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 EPHA10Q5JZY3 1008 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 ATG9AQ7Z3C6 839 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 ZSWIM5Q9P217 1185 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 SCP2P22307 547 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 FKBP1CQ5VVH2 108 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 HEATR3Q7Z4Q2 680 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 RASEFQ8IZ41 740 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 USP14P54578 494 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 CLUL1Q15846 466 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 GNPTABQ3T906 1256 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 CERKLQ49MI3 558 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-203ENST00000395896 HHIPL2Q6UWX4 724 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 NEK8Q86SG6 692 aa3.82□□□□□ -1.8
VPS13C-203ENST00000395896 NPM3O75607 178 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ADCY5O95622 1261 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PTH1RQ03431 593 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 MCF2L2Q86YR7 1114 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 SIPA1L3O60292 1781 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PRPF3O43395 683 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 KRT86O43790 486 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 TXNRD1Q16881 649 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 KRT40Q6A162 431 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 CCDC174Q6PII3 467 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 SKAP1Q86WV1 359 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 MRFAP1L1Q96HT8 127 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 AGXT2Q9BYV1 514 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ANAPC4Q9UJX5 808 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 UBR2Q8IWV8 1755 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PRAMEF22A3QJZ6 481 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 CYLC1P35663 651 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 AP3B2Q13367 1082 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 MAP9Q49MG5 647 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 JAKMIP3Q5VZ66 844 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 SV2BQ7L1I2 683 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 EIF3JO75822 258 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 C2CD5Q86YS7 1000 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 FAM81BQ96LP2 452 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PCDHA12Q9UN75 941 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 CNPY2Q9Y2B0 182 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 V9GY48 417 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 RPS12P25398 132 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 NCBP1Q09161 790 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 CKAP2LQ8IYA6 745 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms