RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 MPRIPQ6WCQ1 1025 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 DNAJC5GQ8N7S2 189 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 CCDC102AQ96A19 550 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 SCLT1Q96NL6 688 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 GORASP1Q9BQQ3 440 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 POLR3CQ9BUI4 534 aaPredicted RBP10.04□□□□□ -0.8
MSH5-205ENST00000395853 CENPHQ9H3R5 247 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 DCTPP1Q9H773 170 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 INCENPQ9NQS7 918 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 TBC1D7Q9P0N9 293 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 IQSEC3Q9UPP2 1182 aaPredicted RBP10.04□□□□□ -0.8
MSH5-205ENST00000395853 CACNA1FO60840 1977 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 CYP27B1O15528 508 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 ERLIN1O75477 346 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 TMEM62Q0P6H9 643 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 VPS53Q5VIR6 699 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 SYNE3Q6ZMZ3 975 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 SAPCD2Q86UD0 394 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 HNRNPLLQ8WVV9 542 aaKnown RBP10.04□□□□□ -0.8
MSH5-205ENST00000395853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.04□□□□□ -0.85e-7■■□□□ 12.3
MSH5-205ENST00000395853 CEMIPQ8WUJ3 1361 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 KCNQ3O43525 872 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 PPP1R12BO60237 982 aaPredicted RBP10.03□□□□□ -0.8
MSH5-205ENST00000395853 PHACTR2O75167 634 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 ARHGAP25P42331 645 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 ETF1P62495 437 aaKnown RBP10.03□□□□□ -0.8
MSH5-205ENST00000395853 FLIIQ13045 1269 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 ARID5BQ14865 1188 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 ZNF530Q6P9A1 599 aaPredicted RBP10.03□□□□□ -0.8
MSH5-205ENST00000395853 BRAPQ7Z569 592 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 C16orf71Q8IYS4 520 aaPredicted RBP10.03□□□□□ -0.8
MSH5-205ENST00000395853 STAG2Q8N3U4 1231 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 SAMD3Q8N6K7 520 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 PPP1R13BQ96KQ4 1090 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 ABCF2Q9UG63 623 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 CORO1CQ9ULV4 474 aaPredicted RBP10.03□□□□□ -0.8
MSH5-205ENST00000395853 ZNF831Q5JPB2 1677 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 RAD21O60216 631 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 RASSF9O75901 435 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 SMNDC1O75940 238 aaKnown RBP eCLIP10.03□□□□□ -0.84e-11■■□□□ 11.9
MSH5-205ENST00000395853 KRT38O76015 456 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 URI1O94763 535 aaPredicted RBP10.03□□□□□ -0.8
MSH5-205ENST00000395853 CCDC175P0C221 793 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 CCDC170Q8IYT3 715 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 RBM46Q8TBY0 533 aaKnown RBP10.03□□□□□ -0.8
MSH5-205ENST00000395853 ZFAND2BQ8WV99 257 aa10.03□□□□□ -0.8
MSH5-205ENST00000395853 LOC102724428A0A0B4J2F2 783 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 PXDNLA1KZ92 1463 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 PDLIM1O00151 329 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 FLT3P36888 993 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 SIK1P57059 783 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 PSMC1P62191 440 aaKnown RBP10.02□□□□□ -0.81
MSH5-205ENST00000395853 CCDC40Q4G0X9 1142 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 HOMER1Q86YM7 354 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 RPAP2Q8IXW5 612 aaPredicted RBP10.02□□□□□ -0.81
MSH5-205ENST00000395853 TRIM58Q8NG06 486 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 PIGBQ92521 554 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 KCNN1Q92952 543 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 DTNBP1Q96EV8 351 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 KIAA1551Q9HCM1 1747 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 RABL2BQ9UNT1 228 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 SPG7Q9UQ90 795 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 APBB1O00213 710 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 FAM200BP0CF97 657 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 SYT1P21579 422 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 CUL3Q13618 768 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 BEND6Q5SZJ8 279 aaPredicted RBP10.02□□□□□ -0.81
MSH5-205ENST00000395853 BZW1Q7L1Q6 419 aaKnown RBP10.02□□□□□ -0.81
MSH5-205ENST00000395853 CBX8Q9HC52 389 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 BABAM1Q9NWV8 329 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 TPCN1Q9ULQ1 816 aa10.02□□□□□ -0.81
MSH5-205ENST00000395853 C10orf71Q711Q0 1435 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 SLC27A2O14975 620 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 MYO1BO43795 1136 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 SHOX2O60902 331 aaPredicted RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 CDC45O75419 566 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 EIF2S2P20042 333 aaKnown RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 RPL13P26373 211 aaKnown RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 CCT4P50991 539 aaKnown RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 MYBPC3Q14896 1274 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 PLCB4Q15147 1175 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 Q4G0T1 1027 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 AKAP4Q5JQC9 854 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 B4GALNT4Q76KP1 1039 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 SPATS2Q86XZ4 545 aaKnown RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 MYOCDQ8IZQ8 938 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 NLGN1Q8N2Q7 840 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 SPAG5Q96R06 1193 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 TSC22D3Q99576 134 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 PHAXQ9H814 394 aaKnown RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 TRPV5Q9NQA5 729 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 WDR90Q96KV7 1748 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 TXLNAP40222 546 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 EIF4A1P60842 406 aaKnown RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 TYRO3Q06418 890 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 FSTL1Q12841 308 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms