RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 DNAJC18Q9H819 358 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 GPHNQ9NQX3 736 aaPredicted RBP15.98■□□□□ 0.15
VAPB-202ENST00000395802 IL17RBQ9NRM6 502 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 RBM28Q9NW13 759 aaKnown RBP15.98■□□□□ 0.15
VAPB-202ENST00000395802 LARGE1O95461 756 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 TOP1P11387 765 aaKnown RBP15.98■□□□□ 0.15
VAPB-202ENST00000395802 AKR1B1P15121 316 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 PDCP20941 246 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 KIF5BP33176 963 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 NECAB1Q8N987 351 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 CTCFLQ8NI51 663 aaPredicted RBP15.98■□□□□ 0.15
VAPB-202ENST00000395802 NKX2-3Q8TAU0 364 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 TEPSINQ96N21 525 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 MTMR4Q9NYA4 1195 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 CHMP5Q9NZZ3 219 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 PGAP2Q9UHJ9 254 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 NID2Q14112 1375 aa15.98■□□□□ 0.15
VAPB-202ENST00000395802 GOLGA8AA7E2F4 631 aa15.97■□□□□ 0.15
VAPB-202ENST00000395802 NMT2O60551 498 aa15.97■□□□□ 0.15
VAPB-202ENST00000395802 NOVP48745 357 aa15.97■□□□□ 0.15
VAPB-202ENST00000395802 CCT2P78371 535 aaKnown RBP15.97■□□□□ 0.15
VAPB-202ENST00000395802 CEP95Q96GE4 821 aa15.97■□□□□ 0.15
VAPB-202ENST00000395802 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
VAPB-202ENST00000395802 SYNPO2Q9UMS6 1093 aa15.97■□□□□ 0.15
VAPB-202ENST00000395802 NUCB2P80303 420 aa15.96■□□□□ 0.15
VAPB-202ENST00000395802 RTN1Q16799 776 aa15.96■□□□□ 0.15
VAPB-202ENST00000395802 FANCBQ8NB91 859 aa15.96■□□□□ 0.15
VAPB-202ENST00000395802 PNMA1Q8ND90 353 aa15.96■□□□□ 0.15
VAPB-202ENST00000395802 NUP133Q8WUM0 1156 aa15.96■□□□□ 0.15
VAPB-202ENST00000395802 TAF1DQ9H5J8 278 aaPredicted RBP15.96■□□□□ 0.15
VAPB-202ENST00000395802 IGKV6D-41A0A0C4DH26 115 aa15.96■□□□□ 0.14
VAPB-202ENST00000395802 ASNSP08243 561 aa15.96■□□□□ 0.14
VAPB-202ENST00000395802 GNAQP50148 359 aa15.96■□□□□ 0.14
VAPB-202ENST00000395802 TROAPQ12815 778 aa15.96■□□□□ 0.14
VAPB-202ENST00000395802 RCSD1Q6JBY9 416 aa15.96■□□□□ 0.14
VAPB-202ENST00000395802 HPS5Q9UPZ3 1129 aa15.96■□□□□ 0.14
VAPB-202ENST00000395802 WDR90Q96KV7 1748 aa15.96■□□□□ 0.14
VAPB-202ENST00000395802 ASTN2O75129 1339 aaPredicted RBP15.95■□□□□ 0.14
VAPB-202ENST00000395802 VEGFAP15692 232 aaPredicted RBP15.95■□□□□ 0.14
VAPB-202ENST00000395802 NF2P35240 595 aa15.95■□□□□ 0.14
VAPB-202ENST00000395802 MIGA2Q7L4E1 593 aa15.95■□□□□ 0.14
VAPB-202ENST00000395802 FAM184AQ8NB25 1140 aa15.95■□□□□ 0.14
VAPB-202ENST00000395802 TMEM47Q9BQJ4 181 aa15.95■□□□□ 0.14
VAPB-202ENST00000395802 ANP32EQ9BTT0 268 aa15.95■□□□□ 0.14
VAPB-202ENST00000395802 ZNF341Q9BYN7 854 aa15.95■□□□□ 0.14
VAPB-202ENST00000395802 SENP2Q9HC62 589 aa15.95■□□□□ 0.14
VAPB-202ENST00000395802 NYAP2Q9P242 653 aa15.95■□□□□ 0.14
VAPB-202ENST00000395802 SIPA1L1O43166 1804 aa15.95■□□□□ 0.14
VAPB-202ENST00000395802 FAM196BA6NMK8 535 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 CTNND1O60716 968 aaKnown RBP15.94■□□□□ 0.14
VAPB-202ENST00000395802 CAP2P40123 477 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 TRIM22Q8IYM9 498 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.94■□□□□ 0.14
VAPB-202ENST00000395802 SH2D4AQ9H788 454 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 GJB2P29033 226 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 ICA1Q05084 483 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 RAB3GAP1Q15042 981 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 CDC37L1Q7L3B6 337 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 KRT26Q7Z3Y9 468 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 WASF1Q92558 559 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 MKL1Q969V6 931 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 LZTS2Q9BRK4 669 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 ARHGEF10LQ9HCE6 1279 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 CLIP2Q9UDT6 1046 aa15.94■□□□□ 0.14
VAPB-202ENST00000395802 GDF11O95390 407 aa15.93■□□□□ 0.14
VAPB-202ENST00000395802 GH2P01242 217 aa15.93■□□□□ 0.14
VAPB-202ENST00000395802 EAPPQ56P03 285 aaPredicted RBP15.93■□□□□ 0.14
VAPB-202ENST00000395802 NBPF12Q5TAG4 269 aaPredicted RBP15.93■□□□□ 0.14
VAPB-202ENST00000395802 NSUN7Q8NE18 718 aaKnown RBP15.93■□□□□ 0.14
VAPB-202ENST00000395802 SMARCC2Q8TAQ2 1214 aa15.93■□□□□ 0.14
VAPB-202ENST00000395802 MYL10Q9BUA6 226 aa15.93■□□□□ 0.14
VAPB-202ENST00000395802 NCOA5Q9HCD5 579 aaKnown RBP15.93■□□□□ 0.14
VAPB-202ENST00000395802 RBM27Q9P2N5 1060 aaKnown RBP15.93■□□□□ 0.14
VAPB-202ENST00000395802 PPP1R12BO60237 982 aaPredicted RBP15.92■□□□□ 0.14
VAPB-202ENST00000395802 IFNAR1P17181 557 aa15.92■□□□□ 0.14
VAPB-202ENST00000395802 AKAP17AQ02040 695 aaKnown RBP15.92■□□□□ 0.14
VAPB-202ENST00000395802 ST3GAL1Q11201 340 aa15.92■□□□□ 0.14
VAPB-202ENST00000395802 USP48Q86UV5 1035 aa15.92■□□□□ 0.14
VAPB-202ENST00000395802 CCDC144CPQ8IYA2 1237 aa15.92■□□□□ 0.14
VAPB-202ENST00000395802 RGS22Q8NE09 1264 aa15.92■□□□□ 0.14
VAPB-202ENST00000395802 ZBTB21Q9ULJ3 1066 aa15.92■□□□□ 0.14
VAPB-202ENST00000395802 PTPDC1A2A3K4 754 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 PARP1P09874 1014 aaKnown RBP15.91■□□□□ 0.14
VAPB-202ENST00000395802 RXRAP19793 462 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 ADD1P35611 737 aaKnown RBP15.91■□□□□ 0.14
VAPB-202ENST00000395802 ATP2B2Q01814 1243 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 SEPT2Q15019 361 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 NFKBIBQ15653 356 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 SCAF8Q9UPN6 1271 aaKnown RBP15.91■□□□□ 0.14
VAPB-202ENST00000395802 PHF20L1A8MW92 1017 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 EEF2P13639 858 aaKnown RBP15.91■□□□□ 0.14
VAPB-202ENST00000395802 SSRP1Q08945 709 aaKnown RBP15.91■□□□□ 0.14
VAPB-202ENST00000395802 GRM4Q14833 912 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 LARP1BQ659C4 914 aaKnown RBP15.91■□□□□ 0.14
VAPB-202ENST00000395802 CDAN1Q8IWY9 1227 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 STK36Q9NRP7 1315 aa15.91■□□□□ 0.14
VAPB-202ENST00000395802 POTECB2RU33 542 aa15.9■□□□□ 0.14
VAPB-202ENST00000395802 SMARCA1P28370 1054 aa15.9■□□□□ 0.14
VAPB-202ENST00000395802 CDC27P30260 824 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms