RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 NKX2-3Q8TAU0 364 aa21.82■■□□□ 1.08
CXCL12-204ENST00000395793 TRIM32Q13049 653 aa21.81■■□□□ 1.08
CXCL12-204ENST00000395793 FEZ1Q99689 392 aa21.81■■□□□ 1.08
CXCL12-204ENST00000395793 KIAA1683Q9H0B3 1180 aa21.81■■□□□ 1.08
CXCL12-204ENST00000395793 PORCNQ9H237 461 aa21.81■■□□□ 1.08
CXCL12-204ENST00000395793 PAK6Q9NQU5 681 aaPredicted RBP21.81■■□□□ 1.08
CXCL12-204ENST00000395793 RLFQ13129 1914 aa21.8■■□□□ 1.08
CXCL12-204ENST00000395793 ALPK3Q96L96 1907 aa21.8■■□□□ 1.08
CXCL12-204ENST00000395793 SGPL1O95470 568 aa21.8■■□□□ 1.08
CXCL12-204ENST00000395793 ERVK-9P63128 1117 aa21.8■■□□□ 1.08
CXCL12-204ENST00000395793 ERVK-24P63145 666 aa21.8■■□□□ 1.08
CXCL12-204ENST00000395793 SEPT2Q15019 361 aa21.8■■□□□ 1.08
CXCL12-204ENST00000395793 DYNLL2Q96FJ2 89 aa21.8■■□□□ 1.08
CXCL12-204ENST00000395793 PAGR1Q9BTK6 254 aa21.8■■□□□ 1.08
CXCL12-204ENST00000395793 CNMDO75829 334 aa21.79■■□□□ 1.08
CXCL12-204ENST00000395793 VCAM1P19320 739 aa21.79■■□□□ 1.08
CXCL12-204ENST00000395793 GPRC5AQ8NFJ5 357 aa21.79■■□□□ 1.08
CXCL12-204ENST00000395793 DEFB118Q96PH6 123 aa21.79■■□□□ 1.08
CXCL12-204ENST00000395793 CABP5Q9NP86 173 aa21.79■■□□□ 1.08
CXCL12-204ENST00000395793 CYP2D7A0A087X1C5 515 aa21.78■■□□□ 1.08
CXCL12-204ENST00000395793 A0A1W2PRG0 241 aa21.78■■□□□ 1.08
CXCL12-204ENST00000395793 HMGCRP04035 888 aa21.78■■□□□ 1.08
CXCL12-204ENST00000395793 TRIB2Q92519 343 aa21.78■■□□□ 1.08
CXCL12-204ENST00000395793 GCC1Q96CN9 775 aa21.78■■□□□ 1.08
CXCL12-204ENST00000395793 DCTPP1Q9H773 170 aa21.78■■□□□ 1.08
CXCL12-204ENST00000395793 A0A0G2JMZ2 1700 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP17L15C9J2P7 530 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP17L13C9JLJ4 530 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP17L11C9JVI0 530 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP17L18D6R9N7 530 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP17L22D6RA61 530 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP17L17D6RBQ6 530 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP17L19D6RCP7 530 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP17L20D6RJB6 530 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 H0YGN5 161 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 FARP2O94887 1054 aaPredicted RBP21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP14P54578 494 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 USP17L24Q0WX57 530 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 UBE3CQ15386 1083 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 HABP4Q5JVS0 413 aaKnown RBP21.77■■□□□ 1.08
CXCL12-204ENST00000395793 TSHZ3Q63HK5 1081 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 CATSPERGQ6ZRH7 1159 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 CLEC10AQ8IUN9 316 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.77■■□□□ 1.08
CXCL12-204ENST00000395793 CRISPLD2Q9H0B8 497 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.77■■□□□ 1.08
CXCL12-204ENST00000395793 PARP14Q460N5 1801 aa21.77■■□□□ 1.08
CXCL12-204ENST00000395793 CYP2B6P20813 491 aa21.76■■□□□ 1.07
CXCL12-204ENST00000395793 USP6NLQ92738 828 aa21.76■■□□□ 1.07
CXCL12-204ENST00000395793 PUS7LQ9H0K6 701 aaKnown RBP21.76■■□□□ 1.07
CXCL12-204ENST00000395793 ATP8A2Q9NTI2 1148 aa21.76■■□□□ 1.07
CXCL12-204ENST00000395793 MPHOSPH10O00566 681 aaKnown RBP21.75■■□□□ 1.07
CXCL12-204ENST00000395793 MAPK4P31152 587 aa21.75■■□□□ 1.07
CXCL12-204ENST00000395793 KIAA1755Q5JYT7 1200 aa21.75■■□□□ 1.07
CXCL12-204ENST00000395793 C12orf60Q5U649 245 aa21.75■■□□□ 1.07
CXCL12-204ENST00000395793 GPR142Q7Z601 462 aa21.75■■□□□ 1.07
CXCL12-204ENST00000395793 GTF3C2Q8WUA4 911 aaPredicted RBP21.75■■□□□ 1.07
CXCL12-204ENST00000395793 RPAP3Q9H6T3 665 aaPredicted RBP21.75■■□□□ 1.07
CXCL12-204ENST00000395793 ECHDC1Q9NTX5 307 aa21.75■■□□□ 1.07
CXCL12-204ENST00000395793 PCDHB15Q9Y5E8 787 aa21.75■■□□□ 1.07
CXCL12-204ENST00000395793 GREB1LQ9C091 1923 aaPredicted RBP21.74■■□□□ 1.07
CXCL12-204ENST00000395793 SPDYE16A6NNV3 312 aaPredicted RBP21.74■■□□□ 1.07
CXCL12-204ENST00000395793 AKR1B1P15121 316 aa21.74■■□□□ 1.07
CXCL12-204ENST00000395793 MORN1Q5T089 497 aa21.74■■□□□ 1.07
CXCL12-204ENST00000395793 SIAH1Q8IUQ4 282 aa21.74■■□□□ 1.07
CXCL12-204ENST00000395793 SOCS4Q8WXH5 440 aa21.74■■□□□ 1.07
CXCL12-204ENST00000395793 NUDT12Q9BQG2 462 aa21.74■■□□□ 1.07
CXCL12-204ENST00000395793 BTBD7Q9P203 1132 aa21.74■■□□□ 1.07
CXCL12-204ENST00000395793 SWAP70Q9UH65 585 aa21.74■■□□□ 1.07
CXCL12-204ENST00000395793 RABGAP1Q9Y3P9 1069 aa21.74■■□□□ 1.07
CXCL12-204ENST00000395793 USP17L12C9JPN9 530 aa21.73■■□□□ 1.07
CXCL12-204ENST00000395793 USP17L21D6R901 530 aa21.73■■□□□ 1.07
CXCL12-204ENST00000395793 TFRCP02786 760 aaKnown RBP21.73■■□□□ 1.07
CXCL12-204ENST00000395793 CCL14Q16627 93 aa21.73■■□□□ 1.07
CXCL12-204ENST00000395793 MAP3K21Q5TCX8 1036 aa21.73■■□□□ 1.07
CXCL12-204ENST00000395793 LBX2Q6XYB7 198 aa21.73■■□□□ 1.07
CXCL12-204ENST00000395793 COLQQ9Y215 455 aaPredicted RBP21.73■■□□□ 1.07
CXCL12-204ENST00000395793 FRMPD3Q5JV73 1810 aa21.73■■□□□ 1.07
CXCL12-204ENST00000395793 CDK8P49336 464 aa21.72■■□□□ 1.07
CXCL12-204ENST00000395793 TMEM179Q6ZVK1 233 aa21.72■■□□□ 1.07
CXCL12-204ENST00000395793 PLEKHH3Q7Z736 793 aa21.72■■□□□ 1.07
CXCL12-204ENST00000395793 DIS3LQ8TF46 1054 aaKnown RBP21.72■■□□□ 1.07
CXCL12-204ENST00000395793 DPF3Q92784 378 aa21.72■■□□□ 1.07
CXCL12-204ENST00000395793 SLC4A4Q9Y6R1 1079 aa21.72■■□□□ 1.07
CXCL12-204ENST00000395793 RPTORQ8N122 1335 aa21.72■■□□□ 1.07
CXCL12-204ENST00000395793 XRCC5P13010 732 aaKnown RBP21.71■■□□□ 1.07
CXCL12-204ENST00000395793 C16orf86Q6ZW13 317 aa21.71■■□□□ 1.07
CXCL12-204ENST00000395793 KBTBD3Q8NAB2 608 aa21.71■■□□□ 1.07
CXCL12-204ENST00000395793 HTATIP2Q9BUP3 242 aa21.71■■□□□ 1.07
CXCL12-204ENST00000395793 HMX1Q9NP08 348 aaPredicted RBP21.71■■□□□ 1.07
CXCL12-204ENST00000395793 TRIOBPQ9H2D6 2365 aa21.71■■□□□ 1.07
CXCL12-204ENST00000395793 PRKAR2AP13861 404 aaKnown RBP21.7■■□□□ 1.06
CXCL12-204ENST00000395793 MNX1P50219 401 aaPredicted RBP21.7■■□□□ 1.06
CXCL12-204ENST00000395793 ZSCAN25Q6NSZ9 544 aa21.7■■□□□ 1.06
CXCL12-204ENST00000395793 CTR9Q6PD62 1173 aa21.7■■□□□ 1.06
CXCL12-204ENST00000395793 OTUD7AQ8TE49 926 aaPredicted RBP21.7■■□□□ 1.06
CXCL12-204ENST00000395793 OSBP2Q969R2 916 aa21.7■■□□□ 1.06
CXCL12-204ENST00000395793 PAWRQ96IZ0 340 aaKnown RBP21.7■■□□□ 1.06
CXCL12-204ENST00000395793 COL11A1P12107 1806 aaPredicted RBP21.69■■□□□ 1.06
CXCL12-204ENST00000395793 ZNF236Q9UL36 1845 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms