RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 NBPF12Q5TAG4 269 aaPredicted RBP17.69■□□□□ 0.42
PTPN20-206ENST00000395722 SYNE3Q6ZMZ3 975 aa17.69■□□□□ 0.42
PTPN20-206ENST00000395722 NCOA5Q9HCD5 579 aaKnown RBP17.69■□□□□ 0.42
PTPN20-206ENST00000395722 PHF20L1A8MW92 1017 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 CTDNEP1O95476 244 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 METAP2P50579 478 aaKnown RBP eCLIP17.68■□□□□ 0.42
PTPN20-206ENST00000395722 CCT2P78371 535 aaKnown RBP17.68■□□□□ 0.42
PTPN20-206ENST00000395722 JAG1P78504 1218 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 ABCB5Q2M3G0 1257 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 SHROOM1Q2M3G4 852 aaPredicted RBP17.68■□□□□ 0.42
PTPN20-206ENST00000395722 PPP4R3BQ5MIZ7 849 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 TMEM179Q6ZVK1 233 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 CATIPQ7Z7H3 387 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 MICU3Q86XE3 530 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 HOOK2Q96ED9 719 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 TMEM47Q9BQJ4 181 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 MYL10Q9BUA6 226 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 NAP1L2Q9ULW6 460 aaPredicted RBP17.68■□□□□ 0.42
PTPN20-206ENST00000395722 SSC5DA1L4H1 1573 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 GOLGA8AA7E2F4 631 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 TOP1P11387 765 aaKnown RBP17.68■□□□□ 0.42
PTPN20-206ENST00000395722 MIGA2Q7L4E1 593 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 PNMA8AQ86V59 439 aaPredicted RBP17.68■□□□□ 0.42
PTPN20-206ENST00000395722 RAB11FIP4Q86YS3 637 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 NSUN7Q8NE18 718 aaKnown RBP17.68■□□□□ 0.42
PTPN20-206ENST00000395722 DCPSQ96C86 337 aaKnown RBP17.68■□□□□ 0.42
PTPN20-206ENST00000395722 MAP3K14Q99558 947 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 KAT14Q9H8E8 782 aa17.68■□□□□ 0.42
PTPN20-206ENST00000395722 CALM1P0DP23 149 aa17.67■□□□□ 0.42
PTPN20-206ENST00000395722 CALM2P0DP24 149 aa17.67■□□□□ 0.42
PTPN20-206ENST00000395722 CALM3P0DP25 149 aa17.67■□□□□ 0.42
PTPN20-206ENST00000395722 CDC27P30260 824 aa17.67■□□□□ 0.42
PTPN20-206ENST00000395722 PPP2R5BQ15173 497 aa17.67■□□□□ 0.42
PTPN20-206ENST00000395722 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
PTPN20-206ENST00000395722 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
PTPN20-206ENST00000395722 STX8Q9UNK0 236 aa17.67■□□□□ 0.42
PTPN20-206ENST00000395722 MPHOSPH10O00566 681 aaKnown RBP17.66■□□□□ 0.42
PTPN20-206ENST00000395722 DHX16O60231 1041 aaKnown RBP17.66■□□□□ 0.42
PTPN20-206ENST00000395722 GDF11O95390 407 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 TTLL1O95922 423 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 RXRAP19793 462 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 CAP2P40123 477 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 DCAF15Q66K64 600 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 FANCBQ8NB91 859 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 PNMA1Q8ND90 353 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 NYAP2Q9P242 653 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 ZNF112Q9UJU3 913 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 SMC3Q9UQE7 1217 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 GH2P01242 217 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 NTRK3Q16288 839 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 CLEC10AQ8IUN9 316 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 SIAH1Q8IUQ4 282 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 SULF1Q8IWU6 871 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 MKL1Q969V6 931 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 GINM1Q9NU53 330 aa17.66■□□□□ 0.42
PTPN20-206ENST00000395722 ADD1P35611 737 aaKnown RBP17.65■□□□□ 0.42
PTPN20-206ENST00000395722 SEPT2Q15019 361 aa17.65■□□□□ 0.42
PTPN20-206ENST00000395722 RTN1Q16799 776 aa17.65■□□□□ 0.42
PTPN20-206ENST00000395722 CABP5Q9NP86 173 aa17.65■□□□□ 0.42
PTPN20-206ENST00000395722 ZBTB21Q9ULJ3 1066 aa17.65■□□□□ 0.42
PTPN20-206ENST00000395722 ADM5C9JUS6 153 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 JAK2O60674 1132 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 SUPT20HL1Q3ZLR7 823 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 PRAMEF18Q5VWM3 479 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 KRT26Q7Z3Y9 468 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 ZNF341Q9BYN7 854 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 MYH4Q9Y623 1939 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 ATAD5Q96QE3 1844 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 CCDC196A0A1B0GTZ2 297 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 GJB2P29033 226 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 GRM4Q14833 912 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 CCDC144CPQ8IYA2 1237 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 NUP133Q8WUM0 1156 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 RBM28Q9NW13 759 aaKnown RBP17.64■□□□□ 0.41
PTPN20-206ENST00000395722 SYNPO2Q9UMS6 1093 aa17.64■□□□□ 0.41
PTPN20-206ENST00000395722 PAPPA2Q9BXP8 1791 aa17.63■□□□□ 0.41
PTPN20-206ENST00000395722 VEGFAP15692 232 aaPredicted RBP17.63■□□□□ 0.41
PTPN20-206ENST00000395722 IFNAR1P17181 557 aa17.63■□□□□ 0.41
PTPN20-206ENST00000395722 HMGN5P82970 282 aaKnown RBP17.63■□□□□ 0.41
PTPN20-206ENST00000395722 ICA1Q05084 483 aa17.63■□□□□ 0.41
PTPN20-206ENST00000395722 CHMP5Q9NZZ3 219 aa17.63■□□□□ 0.41
PTPN20-206ENST00000395722 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
PTPN20-206ENST00000395722 CPLX1O14810 134 aa17.62■□□□□ 0.41
PTPN20-206ENST00000395722 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
PTPN20-206ENST00000395722 SNHG28P0DPA3 235 aa17.62■□□□□ 0.41
PTPN20-206ENST00000395722 EEF2P13639 858 aaKnown RBP17.62■□□□□ 0.41
PTPN20-206ENST00000395722 FUT2Q10981 343 aa17.62■□□□□ 0.41
PTPN20-206ENST00000395722 EAPPQ56P03 285 aaPredicted RBP17.62■□□□□ 0.41
PTPN20-206ENST00000395722 DOCK1Q14185 1865 aa17.62■□□□□ 0.41
PTPN20-206ENST00000395722 DTNBO60941 627 aa17.62■□□□□ 0.41
PTPN20-206ENST00000395722 CDKL5O76039 1030 aa17.62■□□□□ 0.41
PTPN20-206ENST00000395722 ASNSP08243 561 aa17.62■□□□□ 0.41
PTPN20-206ENST00000395722 FDPSP14324 419 aaKnown RBP17.62■□□□□ 0.41
PTPN20-206ENST00000395722 CPLX2Q6PUV4 134 aaKnown RBP17.62■□□□□ 0.41
PTPN20-206ENST00000395722 CTCFLQ8NI51 663 aaPredicted RBP17.62■□□□□ 0.41
PTPN20-206ENST00000395722 STK36Q9NRP7 1315 aa17.61■□□□□ 0.41
PTPN20-206ENST00000395722 KIF5BP33176 963 aa17.61■□□□□ 0.41
PTPN20-206ENST00000395722 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms