RNA–Protein interactions for RNA: ENST00000395469.6

SNCAIP-205, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 3,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-205ENST00000395469 DPF2Q92785 391 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 MYH14Q7Z406 1995 aaKnown RBP13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 COL14A1Q05707 1796 aaKnown RBP13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 POLR2DO15514 142 aaKnown RBP13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 CLCN6P51797 869 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 EVX2Q03828 476 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 GOLGA8FQ08AF8 430 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 GOLGA8DPQ0D2H9 430 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 CFAP100Q494V2 611 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 CCAR2Q8N163 923 aaKnown RBP13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 GOLGA5Q8TBA6 731 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 STK36Q9NRP7 1315 aa13.15□□□□□ -0.3
SNCAIP-205ENST00000395469 FAM205CA6NFA0 338 aa13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 DEXIO95424 95 aa13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 H2AFXP16104 143 aaPredicted RBP13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 UBASH3AP57075 661 aa13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 AKAP17AQ02040 695 aaKnown RBP13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 OLFM4Q6UX06 510 aa13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 ESR2Q92731 530 aa13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 GNL3LQ9NVN8 582 aaKnown RBP13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 ZNF652Q9Y2D9 606 aa13.15□□□□□ -0.31
SNCAIP-205ENST00000395469 COL4A1P02462 1669 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 SLU7O95391 586 aaKnown RBP13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 KLRK1P26718 216 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 MAGEA9P43362 315 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 GSCP56915 257 aaPredicted RBP13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 MYL5Q02045 173 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 MAP2K1Q02750 393 aaPredicted RBP13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 USP49Q70CQ1 688 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 CELF1Q92879 486 aaKnown RBP13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 SGSM3Q96HU1 749 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 OSBPL5Q9H0X9 879 aaPredicted RBP13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 HSD3B7Q9H2F3 369 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 DNAJC5Q9H3Z4 198 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 LRP5O75197 1615 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 PDE4BQ07343 736 aa13.14□□□□□ -0.31
SNCAIP-205ENST00000395469 SERTAD1Q9UHV2 236 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 TAF1P21675 1872 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 BMP6P22004 513 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 ERCC6LQ2NKX8 1250 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 TMTC2Q8N394 836 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 ENAHQ8N8S7 591 aaPredicted RBP13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 CDCA7Q9BWT1 371 aaPredicted RBP13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 ZCCHC17Q9NP64 241 aaKnown RBP13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 IMPACTQ9P2X3 320 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 CCDC189A1A4V9 331 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 IKBKBO14920 756 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 PLEKHA8P1O95397 391 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 MAP2K2P36507 400 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 RILPL1Q5EBL4 403 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 IFIT1BQ5T764 474 aaKnown RBP13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 E4F1Q66K89 784 aaPredicted RBP13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 FBXO2Q9UK22 296 aaPredicted RBP13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 MINPP1Q9UNW1 487 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 V9GY48 417 aaPredicted RBP13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 CHD4Q14839 1912 aa13.13□□□□□ -0.31
SNCAIP-205ENST00000395469 TMEM232C9JQI7 657 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 NYAP1Q6ZVC0 841 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 TRMT44Q8IYL2 757 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 ANKRD20A12PQ8NF67 263 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 FAM84BQ96KN1 310 aaPredicted RBP13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 USP17L12C9JPN9 530 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 USP17L21D6R901 530 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 POSTNQ15063 836 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 FAM98CQ17RN3 349 aaKnown RBP13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 MCTP2Q6DN12 878 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 SHISA4Q96DD7 197 aa13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 ZSCAN10Q96SZ4 725 aaPredicted RBP13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNCAIP-205ENST00000395469 NMT2O60551 498 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 PTPREP23469 700 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 SEMA3FQ13275 785 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 SEC23AQ15436 765 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 EARS2Q5JPH6 523 aaKnown RBP13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 PTF1AQ7RTS3 328 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 CSRNP2Q9H175 543 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 COL1A1P02452 1464 aaPredicted RBP13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 COL16A1Q07092 1604 aaPredicted RBP13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 ZNF804BA4D1E1 1349 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 FAM237AA0A1B0GTK4 181 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 NRDCO43847 1150 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 OAS2P29728 719 aaKnown RBP13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 LMAN1P49257 510 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 UBE4AQ14139 1066 aa13.11□□□□□ -0.31
SNCAIP-205ENST00000395469 FAM47AQ5JRC9 791 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms