RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 MFSD6Q6ZSS7 791 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 CRACR2BQ8N4Y2 399 aaPredicted RBP17.62■□□□□ 0.41
SCAF11-204ENST00000395454 LY9Q9HBG7 655 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 NCOA5Q9HCD5 579 aaKnown RBP17.62■□□□□ 0.41
SCAF11-204ENST00000395454 GOLGA8BA8MQT2 603 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 SLURP2P0DP57 97 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 RCAN1P53805 252 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 ZSCAN23Q3MJ62 389 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 CHADLQ6NUI6 762 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 CAVIN1Q6NZI2 390 aaKnown RBP17.62■□□□□ 0.41
SCAF11-204ENST00000395454 MIGA2Q7L4E1 593 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 TRIM34Q9BYJ4 488 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 ZSCAN16Q9H4T2 348 aaPredicted RBP17.62■□□□□ 0.41
SCAF11-204ENST00000395454 ZSWIM5Q9P217 1185 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 FAM196BA6NMK8 535 aa17.61■□□□□ 0.41
SCAF11-204ENST00000395454 FDPSP14324 419 aaKnown RBP17.61■□□□□ 0.41
SCAF11-204ENST00000395454 UBE2HP62256 183 aa17.61■□□□□ 0.41
SCAF11-204ENST00000395454 CCT2P78371 535 aaKnown RBP17.61■□□□□ 0.41
SCAF11-204ENST00000395454 APOA5Q6Q788 366 aa17.61■□□□□ 0.41
SCAF11-204ENST00000395454 FAM184AQ8NB25 1140 aa17.61■□□□□ 0.41
SCAF11-204ENST00000395454 DYNLL2Q96FJ2 89 aa17.61■□□□□ 0.41
SCAF11-204ENST00000395454 TMEM63CQ9P1W3 806 aa17.61■□□□□ 0.41
SCAF11-204ENST00000395454 TRAF5O00463 557 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 SLC3A2P08195 630 aaKnown RBP17.6■□□□□ 0.41
SCAF11-204ENST00000395454 MRE11P49959 708 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 KRT85P78386 507 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 SUPT20HL1Q3ZLR7 823 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 CDCA5Q96FF9 252 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 GDPD2Q9HCC8 539 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 GADD45BO75293 160 aaPredicted RBP17.6■□□□□ 0.41
SCAF11-204ENST00000395454 GAS2L3Q86XJ1 694 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 SLC44A5Q8NCS7 719 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 EHD4Q9H223 541 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 SIPA1L1O43166 1804 aa17.6■□□□□ 0.41
SCAF11-204ENST00000395454 KDM4AO75164 1064 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 NT5C2P49902 561 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 FOXP4Q8IVH2 680 aaPredicted RBP17.59■□□□□ 0.41
SCAF11-204ENST00000395454 ZNF408Q9H9D4 720 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.59■□□□□ 0.41
SCAF11-204ENST00000395454 TOMM22Q9NS69 142 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 PRDM1O75626 825 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 FMR1Q06787 632 aaKnown RBP eCLIP17.59■□□□□ 0.416e-11■□□□□ 10.5
SCAF11-204ENST00000395454 PDE4BQ07343 736 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 FOXD4L6Q3SYB3 417 aaPredicted RBP17.59■□□□□ 0.41
SCAF11-204ENST00000395454 FOXD4L3Q6VB84 417 aaPredicted RBP17.59■□□□□ 0.41
SCAF11-204ENST00000395454 HOOK2Q96ED9 719 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 SCAND2PQ9GZW5 306 aaPredicted RBP17.59■□□□□ 0.41
SCAF11-204ENST00000395454 DNAJC18Q9H819 358 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 MKNK2Q9HBH9 465 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 INCENPQ9NQS7 918 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 HERC5Q9UII4 1024 aaKnown RBP17.59■□□□□ 0.41
SCAF11-204ENST00000395454 FZD1Q9UP38 647 aa17.59■□□□□ 0.41
SCAF11-204ENST00000395454 ROBO3Q96MS0 1386 aa17.58■□□□□ 0.41
SCAF11-204ENST00000395454 FIBPO43427 364 aa17.58■□□□□ 0.4
SCAF11-204ENST00000395454 TOMM70O94826 608 aa17.58■□□□□ 0.4
SCAF11-204ENST00000395454 NCLP19338 710 aaKnown RBP17.58■□□□□ 0.4
SCAF11-204ENST00000395454 NF2P35240 595 aa17.58■□□□□ 0.4
SCAF11-204ENST00000395454 GABPAQ06546 454 aa17.58■□□□□ 0.4
SCAF11-204ENST00000395454 PRKG1Q13976 671 aa17.58■□□□□ 0.4
SCAF11-204ENST00000395454 TMEM67Q5HYA8 995 aa17.58■□□□□ 0.4
SCAF11-204ENST00000395454 C16orf86Q6ZW13 317 aa17.58■□□□□ 0.4
SCAF11-204ENST00000395454 FERMT3Q86UX7 667 aa17.58■□□□□ 0.4
SCAF11-204ENST00000395454 MYH8P13535 1937 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 H3BQV1 296 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 XRCC6P12956 609 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCAF11-204ENST00000395454 CDK8P49336 464 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 RRP12Q5JTH9 1297 aaKnown RBP17.57■□□□□ 0.4
SCAF11-204ENST00000395454 IFFO2Q5TF58 517 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 ATL3Q6DD88 541 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 TMTC2Q8N394 836 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 SMC1BQ8NDV3 1235 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 SYAP1Q96A49 352 aaPredicted RBP17.57■□□□□ 0.4
SCAF11-204ENST00000395454 GRPEL1Q9HAV7 217 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 ZNF287Q9HBT7 754 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 SENP2Q9HC62 589 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCAF11-204ENST00000395454 SSC5DA1L4H1 1573 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 ORC4O43929 436 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 CDKL5O76039 1030 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 SART3Q15020 963 aaKnown RBP17.57■□□□□ 0.4
SCAF11-204ENST00000395454 NTRK3Q16288 839 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 DCAF15Q66K64 600 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 METTL16Q86W50 562 aaKnown RBP17.57■□□□□ 0.4
SCAF11-204ENST00000395454 SWAP70Q9UH65 585 aa17.57■□□□□ 0.4
SCAF11-204ENST00000395454 STK36Q9NRP7 1315 aa17.56■□□□□ 0.4
SCAF11-204ENST00000395454 IFIT3O14879 490 aaKnown RBP17.56■□□□□ 0.4
SCAF11-204ENST00000395454 ZBTB43O43298 467 aa17.56■□□□□ 0.4
SCAF11-204ENST00000395454 TBC1D12O60347 775 aa17.56■□□□□ 0.4
SCAF11-204ENST00000395454 ITGBL1O95965 494 aaPredicted RBP17.56■□□□□ 0.4
SCAF11-204ENST00000395454 METAP2P50579 478 aaKnown RBP eCLIP17.56■□□□□ 0.4
SCAF11-204ENST00000395454 SEC23AQ15436 765 aa17.56■□□□□ 0.4
SCAF11-204ENST00000395454 ESR2Q92731 530 aa17.56■□□□□ 0.4
SCAF11-204ENST00000395454 FAM217BQ9NTX9 383 aaPredicted RBP17.56■□□□□ 0.4
SCAF11-204ENST00000395454 RBM27Q9P2N5 1060 aaKnown RBP17.56■□□□□ 0.4
SCAF11-204ENST00000395454 NAP1L2Q9ULW6 460 aaPredicted RBP17.56■□□□□ 0.4
SCAF11-204ENST00000395454 PPP1R12BO60237 982 aaPredicted RBP17.55■□□□□ 0.4
SCAF11-204ENST00000395454 SHMT1P34896 483 aa17.55■□□□□ 0.4
SCAF11-204ENST00000395454 ADD1P35611 737 aaKnown RBP17.55■□□□□ 0.4
SCAF11-204ENST00000395454 TTLL12Q14166 644 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms