RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 C11orf49Q9H6J7 331 aa16.46■□□□□ 0.23
SCAF11-203ENST00000395453 JAG1P78504 1218 aa16.45■□□□□ 0.22
SCAF11-203ENST00000395453 TREML2Q5T2D2 321 aa16.45■□□□□ 0.22
SCAF11-203ENST00000395453 C20orf194Q5TEA3 1177 aa16.45■□□□□ 0.22
SCAF11-203ENST00000395453 MIGA1Q8NAN2 632 aa16.45■□□□□ 0.22
SCAF11-203ENST00000395453 WDR18Q9BV38 432 aa16.45■□□□□ 0.22
SCAF11-203ENST00000395453 GINM1Q9NU53 330 aa16.45■□□□□ 0.22
SCAF11-203ENST00000395453 ASNSP08243 561 aa16.45■□□□□ 0.22
SCAF11-203ENST00000395453 TTF1Q15361 905 aaPredicted RBP16.45■□□□□ 0.22
SCAF11-203ENST00000395453 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCAF11-203ENST00000395453 ZNF579Q8NAF0 562 aaKnown RBP16.45■□□□□ 0.22
SCAF11-203ENST00000395453 LOC285556D6RIA3 1793 aa16.44■□□□□ 0.22
SCAF11-203ENST00000395453 MYH1P12882 1939 aa16.44■□□□□ 0.22
SCAF11-203ENST00000395453 GCLCP48506 637 aaPredicted RBP16.44■□□□□ 0.22
SCAF11-203ENST00000395453 HMGCS2P54868 508 aa16.44■□□□□ 0.22
SCAF11-203ENST00000395453 RIOK1Q9BRS2 568 aaKnown RBP16.44■□□□□ 0.22
SCAF11-203ENST00000395453 AS3MTQ9HBK9 375 aa16.44■□□□□ 0.22
SCAF11-203ENST00000395453 SAP30BPQ9UHR5 308 aaKnown RBP16.44■□□□□ 0.22
SCAF11-203ENST00000395453 OGDHLQ9ULD0 1010 aa16.44■□□□□ 0.22
SCAF11-203ENST00000395453 LAMA2P24043 3122 aaKnown RBP16.43■□□□□ 0.22
SCAF11-203ENST00000395453 SPDYE4A6NLX3 237 aa16.43■□□□□ 0.22
SCAF11-203ENST00000395453 APBB1O00213 710 aa16.43■□□□□ 0.22
SCAF11-203ENST00000395453 HLA-DOAP06340 250 aa16.43■□□□□ 0.22
SCAF11-203ENST00000395453 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
SCAF11-203ENST00000395453 BACE1P56817 501 aa16.43■□□□□ 0.22
SCAF11-203ENST00000395453 CRACR2BQ8N4Y2 399 aaPredicted RBP16.43■□□□□ 0.22
SCAF11-203ENST00000395453 GJD2Q9UKL4 321 aa16.43■□□□□ 0.22
SCAF11-203ENST00000395453 PDE6AP16499 860 aa16.42■□□□□ 0.22
SCAF11-203ENST00000395453 USP5P45974 858 aa16.42■□□□□ 0.22
SCAF11-203ENST00000395453 PABPC4Q13310 644 aaKnown RBP eCLIP16.42■□□□□ 0.22
SCAF11-203ENST00000395453 SHROOM1Q2M3G4 852 aaPredicted RBP16.42■□□□□ 0.22
SCAF11-203ENST00000395453 SLC9C2Q5TAH2 1124 aa16.42■□□□□ 0.22
SCAF11-203ENST00000395453 TATDN1Q6P1N9 297 aa16.42■□□□□ 0.22
SCAF11-203ENST00000395453 EHD4Q9H223 541 aa16.42■□□□□ 0.22
SCAF11-203ENST00000395453 VCANP13611 3396 aa16.41■□□□□ 0.22
SCAF11-203ENST00000395453 TCRBV5S4A2TA0A5A2 114 aa16.41■□□□□ 0.22
SCAF11-203ENST00000395453 C19orf81C9J6K1 198 aa16.41■□□□□ 0.22
SCAF11-203ENST00000395453 ATP5JP18859 108 aa16.41■□□□□ 0.22
SCAF11-203ENST00000395453 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
SCAF11-203ENST00000395453 TRIM32Q13049 653 aa16.41■□□□□ 0.22
SCAF11-203ENST00000395453 FAM109BQ6ICB4 259 aaPredicted RBP16.41■□□□□ 0.22
SCAF11-203ENST00000395453 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
SCAF11-203ENST00000395453 ASCC2Q9H1I8 757 aaPredicted RBP16.41■□□□□ 0.22
SCAF11-203ENST00000395453 ZBTB21Q9ULJ3 1066 aa16.41■□□□□ 0.22
SCAF11-203ENST00000395453 DDX60LQ5H9U9 1706 aaKnown RBP16.4■□□□□ 0.22
SCAF11-203ENST00000395453 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
SCAF11-203ENST00000395453 USP17L10C9JJH3 530 aa16.4■□□□□ 0.22
SCAF11-203ENST00000395453 GOLIM4O00461 696 aa16.4■□□□□ 0.22
SCAF11-203ENST00000395453 GDF11O95390 407 aa16.4■□□□□ 0.22
SCAF11-203ENST00000395453 MTMR2Q13614 643 aa16.4■□□□□ 0.22
SCAF11-203ENST00000395453 TTC6Q86TZ1 520 aa16.4■□□□□ 0.22
SCAF11-203ENST00000395453 SERPINB13Q9UIV8 391 aa16.4■□□□□ 0.22
SCAF11-203ENST00000395453 PFASO15067 1338 aa16.39■□□□□ 0.21
SCAF11-203ENST00000395453 ZNF532Q9HCE3 1301 aa16.39■□□□□ 0.21
SCAF11-203ENST00000395453 POTEB2H3BUK9 544 aa16.39■□□□□ 0.21
SCAF11-203ENST00000395453 PLCD1P51178 756 aa16.39■□□□□ 0.21
SCAF11-203ENST00000395453 MAP3K21Q5TCX8 1036 aa16.39■□□□□ 0.21
SCAF11-203ENST00000395453 TRIB2Q92519 343 aa16.39■□□□□ 0.21
SCAF11-203ENST00000395453 EDC3Q96F86 508 aaKnown RBP16.39■□□□□ 0.21
SCAF11-203ENST00000395453 DNAJC2Q99543 621 aaKnown RBP16.39■□□□□ 0.21
SCAF11-203ENST00000395453 GABPAQ06546 454 aa16.38■□□□□ 0.21
SCAF11-203ENST00000395453 DCBLD2Q96PD2 775 aa16.38■□□□□ 0.21
SCAF11-203ENST00000395453 HAUS7Q99871 368 aa16.38■□□□□ 0.21
SCAF11-203ENST00000395453 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
SCAF11-203ENST00000395453 LRRCC1Q9C099 1032 aa16.38■□□□□ 0.21
SCAF11-203ENST00000395453 PAG1Q9NWQ8 432 aa16.38■□□□□ 0.21
SCAF11-203ENST00000395453 MORF4L1Q9UBU8 362 aa16.38■□□□□ 0.21
SCAF11-203ENST00000395453 GH2P01242 217 aa16.37■□□□□ 0.21
SCAF11-203ENST00000395453 COL6A1P12109 1028 aa16.37■□□□□ 0.21
SCAF11-203ENST00000395453 XRCC5P13010 732 aaKnown RBP16.37■□□□□ 0.21
SCAF11-203ENST00000395453 CYP2B6P20813 491 aa16.37■□□□□ 0.21
SCAF11-203ENST00000395453 MDM2Q00987 491 aaPredicted RBP16.37■□□□□ 0.21
SCAF11-203ENST00000395453 TRMT44Q8IYL2 757 aaKnown RBP16.37■□□□□ 0.21
SCAF11-203ENST00000395453 SOCS4Q8WXH5 440 aa16.37■□□□□ 0.21
SCAF11-203ENST00000395453 GUCD1Q96NT3 240 aa16.37■□□□□ 0.21
SCAF11-203ENST00000395453 P2RX7Q99572 595 aaKnown RBP16.37■□□□□ 0.21
SCAF11-203ENST00000395453 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
SCAF11-203ENST00000395453 EMILIN3Q9NT22 766 aa16.37■□□□□ 0.21
SCAF11-203ENST00000395453 TMOD4Q9NZQ9 345 aa16.37■□□□□ 0.21
SCAF11-203ENST00000395453 SHMT1P34896 483 aa16.36■□□□□ 0.21
SCAF11-203ENST00000395453 ADD2P35612 726 aa16.36■□□□□ 0.21
SCAF11-203ENST00000395453 CERKLQ49MI3 558 aaPredicted RBP16.36■□□□□ 0.21
SCAF11-203ENST00000395453 DNAH12Q6ZR08 3092 aa16.36■□□□□ 0.21
SCAF11-203ENST00000395453 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
SCAF11-203ENST00000395453 DCTPP1Q9H773 170 aa16.36■□□□□ 0.21
SCAF11-203ENST00000395453 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
SCAF11-203ENST00000395453 EYSQ5T1H1 3165 aa16.35■□□□□ 0.21
SCAF11-203ENST00000395453 POLR3DP05423 398 aaPredicted RBP16.35■□□□□ 0.21
SCAF11-203ENST00000395453 IRX3P78415 501 aaPredicted RBP16.35■□□□□ 0.21
SCAF11-203ENST00000395453 LRRC26Q2I0M4 334 aa16.35■□□□□ 0.21
SCAF11-203ENST00000395453 USP17L2Q6R6M4 530 aa16.35■□□□□ 0.21
SCAF11-203ENST00000395453 LCORLQ8N3X6 602 aa16.35■□□□□ 0.21
SCAF11-203ENST00000395453 C12orf42Q96LP6 360 aa16.35■□□□□ 0.21
SCAF11-203ENST00000395453 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
SCAF11-203ENST00000395453 BCL11AQ9H165 835 aa16.35■□□□□ 0.21
SCAF11-203ENST00000395453 SMARCA5O60264 1052 aaPredicted RBP16.34■□□□□ 0.21
SCAF11-203ENST00000395453 ZKSCAN1P17029 563 aaPredicted RBP16.34■□□□□ 0.21
SCAF11-203ENST00000395453 HERVK_113P62684 666 aa16.34■□□□□ 0.21
SCAF11-203ENST00000395453 ABCB5Q2M3G0 1257 aa16.34■□□□□ 0.21
SCAF11-203ENST00000395453 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms