RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SPECC1LQ69YQ0 1117 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 TRIM22Q8IYM9 498 aa20.97■□□□□ 0.95
PCDHA1-202ENST00000394633 STX10O60499 249 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 PLA2G4AP47712 749 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 ADKP55263 362 aaKnown RBP20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 MAP3K12Q12852 859 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 TOGARAM2Q6ZUX3 1019 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 CMTR1Q8N1G2 835 aaKnown RBP20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 CCDC82Q8N4S0 544 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 MPHOSPH8Q99549 860 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 DACH1Q9UI36 760 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 MROH5Q6ZUA9 1318 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 ACTN4O43707 911 aaKnown RBP20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 CDK11BP21127 795 aaKnown RBP20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 WTAPQ15007 396 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 PARP10Q53GL7 1025 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 ZNF579Q8NAF0 562 aaKnown RBP20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 STAG1Q8WVM7 1258 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 WDR24Q96S15 920 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 SEC31BQ9NQW1 1179 aa20.96■□□□□ 0.95
PCDHA1-202ENST00000394633 SNAP23O00161 211 aa20.95■□□□□ 0.94
PCDHA1-202ENST00000394633 SLC27A3Q5K4L6 730 aa20.95■□□□□ 0.94
PCDHA1-202ENST00000394633 CRACR2BQ8N4Y2 399 aaPredicted RBP20.95■□□□□ 0.94
PCDHA1-202ENST00000394633 OXER1Q8TDS5 423 aa20.95■□□□□ 0.94
PCDHA1-202ENST00000394633 ARGLU1Q9NWB6 273 aaPredicted RBP20.95■□□□□ 0.94
PCDHA1-202ENST00000394633 SRPRBQ9Y5M8 271 aaKnown RBP20.95■□□□□ 0.94
PCDHA1-202ENST00000394633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 GOLGA6L9A6NEM1 432 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 DEXIO95424 95 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 TMCO3Q6UWJ1 677 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 USP49Q70CQ1 688 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 LCORLQ8N3X6 602 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 TRIML1Q8N9V2 468 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 TNS1Q9HBL0 1735 aaKnown RBP20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 TOMM22Q9NS69 142 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 SAMSN1Q9NSI8 373 aaKnown RBP20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 ZPR1O75312 459 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 APBA3O96018 575 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 SLC5A1P13866 664 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 CASQ1P31415 396 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 GNG11P61952 73 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 MYH2Q9UKX2 1941 aa20.94■□□□□ 0.94
PCDHA1-202ENST00000394633 TDO2P48775 406 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 MAP3K9P80192 1104 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 RAI14Q9P0K7 980 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 LAMB2P55268 1798 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 COL4A1P02462 1669 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 COL24A1Q17RW2 1714 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 ATP2B1P20020 1258 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 PLCD1P51178 756 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 NR1I3Q14994 352 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 SART3Q15020 963 aaKnown RBP20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 TRAPPC3LQ5T215 181 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 SPATA20Q8TB22 786 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 KIFC2Q96AC6 838 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 CSRNP2Q9H175 543 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 SLC4A4Q9Y6R1 1079 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 CASZ1Q86V15 1759 aa20.93■□□□□ 0.94
PCDHA1-202ENST00000394633 RFC4P35249 363 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 NOL10Q9BSC4 688 aaKnown RBP20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 EPC1Q9H2F5 836 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 MRFAP1Q9Y605 127 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 TPM1P09493 284 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 FAM193AP78312 1265 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 ERFEQ4G0M1 354 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 KANK3Q6NY19 840 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 ZNF654Q8IZM8 581 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 FANCBQ8NB91 859 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 CABP5Q9NP86 173 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 CEP131Q9UPN4 1083 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
PCDHA1-202ENST00000394633 SEC31AO94979 1220 aaKnown RBP20.91■□□□□ 0.94
PCDHA1-202ENST00000394633 C3orf67Q6ZVT6 689 aa20.91■□□□□ 0.94
PCDHA1-202ENST00000394633 NUP133Q8WUM0 1156 aa20.91■□□□□ 0.94
PCDHA1-202ENST00000394633 SHISA4Q96DD7 197 aa20.91■□□□□ 0.94
PCDHA1-202ENST00000394633 DESI2Q9BSY9 194 aa20.91■□□□□ 0.94
PCDHA1-202ENST00000394633 NACAP1Q9BZK3 213 aa20.91■□□□□ 0.94
PCDHA1-202ENST00000394633 A0A1B0GTH6 734 aa20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 CCDC196A0A1B0GTZ2 297 aa20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 ERICH2A1L162 156 aa20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 GNAT2P19087 354 aa20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 TAF3Q5VWG9 929 aa20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 CCDC24Q8N4L8 307 aa20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 ERCC5P28715 1186 aaPredicted RBP20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 PPP2R3AQ06190 1150 aa20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 APTXQ7Z2E3 356 aaKnown RBP20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 MTA3Q9BTC8 594 aa20.9■□□□□ 0.94
PCDHA1-202ENST00000394633 A0A087X0B3 334 aa20.89■□□□□ 0.94
PCDHA1-202ENST00000394633 FAM205CA6NFA0 338 aa20.89■□□□□ 0.94
PCDHA1-202ENST00000394633 PLSCR1O15162 318 aa20.89■□□□□ 0.94
PCDHA1-202ENST00000394633 MTF1Q14872 753 aa20.89■□□□□ 0.94
PCDHA1-202ENST00000394633 KARSQ15046 597 aaKnown RBP20.89■□□□□ 0.94
PCDHA1-202ENST00000394633 CREBRFQ8IUR6 639 aa20.89■□□□□ 0.94
PCDHA1-202ENST00000394633 TMTC2Q8N394 836 aa20.89■□□□□ 0.94
PCDHA1-202ENST00000394633 TAF1P21675 1872 aa20.89■□□□□ 0.93
PCDHA1-202ENST00000394633 TEX33O43247 280 aa20.89■□□□□ 0.93
PCDHA1-202ENST00000394633 RCAN1P53805 252 aa20.89■□□□□ 0.93
PCDHA1-202ENST00000394633 RSRC2Q7L4I2 434 aaKnown RBP20.89■□□□□ 0.93
PCDHA1-202ENST00000394633 MIGA1Q8NAN2 632 aa20.89■□□□□ 0.93
PCDHA1-202ENST00000394633 MRPL44Q9H9J2 332 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms