RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 RRP12Q5JTH9 1297 aaKnown RBP17.75■□□□□ 0.43
PTBP1-204ENST00000394601 ENAHQ8N8S7 591 aaPredicted RBP17.75■□□□□ 0.43
PTBP1-204ENST00000394601 JMYQ8N9B5 988 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 KRI1Q8N9T8 703 aaKnown RBP17.75■□□□□ 0.43
PTBP1-204ENST00000394601 NACAP1Q9BZK3 213 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 RABEP2Q9H5N1 569 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 PCDHA5Q9Y5H7 936 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 DEXIO95424 95 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 ADAMTS2O95450 1211 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 GSDMDP57764 484 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 FANCCQ00597 558 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 GPS2Q13227 327 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 FHOD1Q9Y613 1164 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 MAST2Q6P0Q8 1798 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 IRS2Q9Y4H2 1338 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 CYP2D7A0A087X1C5 515 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 DYNLL1P63167 89 aaKnown RBP17.75■□□□□ 0.43
PTBP1-204ENST00000394601 SYCP1Q15431 976 aa17.75■□□□□ 0.43
PTBP1-204ENST00000394601 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.75■□□□□ 0.43
PTBP1-204ENST00000394601 TNKSO95271 1327 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 WNT7AO00755 349 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
PTBP1-204ENST00000394601 UBE4AQ14139 1066 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 EP400NLQ6ZTU2 488 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 SPATA20Q8TB22 786 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 CELF1Q92879 486 aaKnown RBP17.74■□□□□ 0.43
PTBP1-204ENST00000394601 FAM205CA6NFA0 338 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 PRR29P0C7W0 189 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 TPM4P67936 248 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 WASF1Q92558 559 aa17.74■□□□□ 0.43
PTBP1-204ENST00000394601 KCNJ6P48051 423 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 USP49Q70CQ1 688 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 PTF1AQ7RTS3 328 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 FBXO33Q7Z6M2 555 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 TMTC2Q8N394 836 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 CCDC82Q8N4S0 544 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 CDC5LQ99459 802 aaKnown RBP17.73■□□□□ 0.43
PTBP1-204ENST00000394601 SRRTQ9BXP5 876 aaKnown RBP17.73■□□□□ 0.43
PTBP1-204ENST00000394601 MAGEB6P1A0A0J9YX57 407 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 ACTN4O43707 911 aaKnown RBP17.73■□□□□ 0.43
PTBP1-204ENST00000394601 TRIM29Q14134 588 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 ZNF579Q8NAF0 562 aaKnown RBP17.73■□□□□ 0.43
PTBP1-204ENST00000394601 TNFRSF25Q93038 417 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 BRIP1Q9BX63 1249 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 TROAPQ12815 778 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 PDILTQ8N807 584 aa17.73■□□□□ 0.43
PTBP1-204ENST00000394601 RNF41Q9H4P4 317 aaPredicted RBP17.73■□□□□ 0.43
PTBP1-204ENST00000394601 A0A087X0B3 334 aa17.72■□□□□ 0.43
PTBP1-204ENST00000394601 SFPQP23246 707 aaKnown RBP eCLIP17.72■□□□□ 0.434e-7■■□□□ 12.7
PTBP1-204ENST00000394601 RILPL1Q5EBL4 403 aa17.72■□□□□ 0.43
PTBP1-204ENST00000394601 CTR9Q6PD62 1173 aa17.72■□□□□ 0.43
PTBP1-204ENST00000394601 PHF20Q9BVI0 1012 aa17.72■□□□□ 0.43
PTBP1-204ENST00000394601 RNF26Q9BY78 433 aaPredicted RBP17.72■□□□□ 0.43
PTBP1-204ENST00000394601 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.72■□□□□ 0.431e-6■■□□□ 13.4
PTBP1-204ENST00000394601 SRPRBQ9Y5M8 271 aaKnown RBP17.72■□□□□ 0.43
PTBP1-204ENST00000394601 TNRC6CQ9HCJ0 1690 aaKnown RBP17.72■□□□□ 0.43
PTBP1-204ENST00000394601 KCNQ4P56696 695 aa17.72■□□□□ 0.43
PTBP1-204ENST00000394601 ZSCAN10Q96SZ4 725 aaPredicted RBP17.72■□□□□ 0.43
PTBP1-204ENST00000394601 MAN1B1Q9UKM7 699 aa17.72■□□□□ 0.43
PTBP1-204ENST00000394601 ZNF18P17022 549 aa17.71■□□□□ 0.43
PTBP1-204ENST00000394601 MYL5Q02045 173 aa17.71■□□□□ 0.43
PTBP1-204ENST00000394601 FMR1Q06787 632 aaKnown RBP eCLIP17.71■□□□□ 0.432e-7■■□□□ 12.6
PTBP1-204ENST00000394601 TBC1D9BQ66K14 1250 aa17.71■□□□□ 0.43
PTBP1-204ENST00000394601 TMEM139Q8IV31 216 aa17.71■□□□□ 0.43
PTBP1-204ENST00000394601 NSUN4Q96CB9 384 aaKnown RBP17.71■□□□□ 0.43
PTBP1-204ENST00000394601 VPS18Q9P253 973 aa17.71■□□□□ 0.43
PTBP1-204ENST00000394601 FANCGO15287 622 aa17.71■□□□□ 0.43
PTBP1-204ENST00000394601 SMC1AQ14683 1233 aaKnown RBP17.71■□□□□ 0.43
PTBP1-204ENST00000394601 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
PTBP1-204ENST00000394601 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
PTBP1-204ENST00000394601 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
PTBP1-204ENST00000394601 ABCF2Q9UG63 623 aa17.71■□□□□ 0.43
PTBP1-204ENST00000394601 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.42
PTBP1-204ENST00000394601 PLEKHA8P1O95397 391 aa17.71■□□□□ 0.42
PTBP1-204ENST00000394601 MORC3Q14149 939 aa17.71■□□□□ 0.42
PTBP1-204ENST00000394601 NOM1Q5C9Z4 860 aaKnown RBP17.71■□□□□ 0.42
PTBP1-204ENST00000394601 CNNM3Q8NE01 707 aa17.71■□□□□ 0.42
PTBP1-204ENST00000394601 PPP1R13BQ96KQ4 1090 aa17.71■□□□□ 0.42
PTBP1-204ENST00000394601 FANCLQ9NW38 375 aa17.71■□□□□ 0.42
PTBP1-204ENST00000394601 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.71■□□□□ 0.423e-9■■□□□ 11.7
PTBP1-204ENST00000394601 MINDY4BA8MYZ0 360 aa17.7■□□□□ 0.42
PTBP1-204ENST00000394601 TMEM232C9JQI7 657 aa17.7■□□□□ 0.42
PTBP1-204ENST00000394601 TULP2O00295 520 aa17.7■□□□□ 0.42
PTBP1-204ENST00000394601 AMIGO3Q86WK7 504 aa17.7■□□□□ 0.42
PTBP1-204ENST00000394601 DHX37Q8IY37 1157 aaKnown RBP17.7■□□□□ 0.42
PTBP1-204ENST00000394601 CCDC150Q8NCX0 1101 aa17.7■□□□□ 0.42
PTBP1-204ENST00000394601 VSTM4Q8IW00 320 aa17.7■□□□□ 0.42
PTBP1-204ENST00000394601 TRIM22Q8IYM9 498 aa17.7■□□□□ 0.42
PTBP1-204ENST00000394601 ESR2Q92731 530 aa17.7■□□□□ 0.42
PTBP1-204ENST00000394601 PDS5AQ29RF7 1337 aaKnown RBP17.69■□□□□ 0.42
PTBP1-204ENST00000394601 CCDC196A0A1B0GTZ2 297 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 ADAMTS3O15072 1205 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 RGL2O15211 777 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 TBX2Q13207 712 aaPredicted RBP17.69■□□□□ 0.42
PTBP1-204ENST00000394601 GRAMD1CQ8IYS0 662 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 RAI14Q9P0K7 980 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 SERTAD1Q9UHV2 236 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 BTAF1O14981 1849 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms