RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SYKP43405 635 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 PPP2R5BQ15173 497 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 CERS5Q8N5B7 392 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 PHF20Q9BVI0 1012 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 KCNQ5Q9NR82 932 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.36■□□□□ 0.37
GPC3-202ENST00000394299 RBM28Q9NW13 759 aaKnown RBP17.36■□□□□ 0.37
GPC3-202ENST00000394299 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
GPC3-202ENST00000394299 CALM1P0DP23 149 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 CALM2P0DP24 149 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 CALM3P0DP25 149 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 DPCR1Q3MIW9 517 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 ZNF444Q8N0Y2 327 aaPredicted RBP17.36■□□□□ 0.37
GPC3-202ENST00000394299 C17orf53Q8N3J3 647 aaPredicted RBP17.36■□□□□ 0.37
GPC3-202ENST00000394299 HPSEQ9Y251 543 aa17.36■□□□□ 0.37
GPC3-202ENST00000394299 TSPY3P0CV98 308 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 TSPY8P0CW00 308 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 RASA1P20936 1047 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 NPY5RQ15761 445 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 ZNF772Q68DY9 489 aaPredicted RBP17.35■□□□□ 0.37
GPC3-202ENST00000394299 PNMA1Q8ND90 353 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 ZNF622Q969S3 477 aaKnown RBP eCLIP17.35■□□□□ 0.37
GPC3-202ENST00000394299 TRIM5Q9C035 493 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 KAT14Q9H8E8 782 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 FOXN1O15353 648 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 LONRF3Q496Y0 759 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 RESP18Q5W5W9 173 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 USP49Q70CQ1 688 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 DHX40Q8IX18 779 aaKnown RBP17.35■□□□□ 0.37
GPC3-202ENST00000394299 ZC3H12CQ9C0D7 883 aaKnown RBP17.35■□□□□ 0.37
GPC3-202ENST00000394299 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 STX8Q9UNK0 236 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 MAST2Q6P0Q8 1798 aa17.35■□□□□ 0.37
GPC3-202ENST00000394299 FLT1P17948 1338 aa17.34■□□□□ 0.37
GPC3-202ENST00000394299 CDK8P49336 464 aa17.34■□□□□ 0.37
GPC3-202ENST00000394299 SCNN1DP51172 638 aa17.34■□□□□ 0.37
GPC3-202ENST00000394299 PICALMQ13492 652 aa17.34■□□□□ 0.37
GPC3-202ENST00000394299 SLC35G1Q2M3R5 365 aa17.34■□□□□ 0.37
GPC3-202ENST00000394299 TMED8Q6PL24 325 aaPredicted RBP17.34■□□□□ 0.37
GPC3-202ENST00000394299 JMYQ8N9B5 988 aa17.34■□□□□ 0.37
GPC3-202ENST00000394299 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
GPC3-202ENST00000394299 ANO10Q9NW15 660 aa17.34■□□□□ 0.37
GPC3-202ENST00000394299 FBXO2Q9UK22 296 aaPredicted RBP17.34■□□□□ 0.37
GPC3-202ENST00000394299 DAGLAQ9Y4D2 1042 aa17.34■□□□□ 0.37
GPC3-202ENST00000394299 PARP3Q9Y6F1 533 aa17.34■□□□□ 0.37
GPC3-202ENST00000394299 GOLGA8HP0CJ92 632 aa17.33■□□□□ 0.37
GPC3-202ENST00000394299 NPR1P16066 1061 aa17.33■□□□□ 0.37
GPC3-202ENST00000394299 PNOCQ13519 176 aa17.33■□□□□ 0.37
GPC3-202ENST00000394299 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.37
GPC3-202ENST00000394299 DPP8Q6V1X1 898 aaPredicted RBP17.33■□□□□ 0.37
GPC3-202ENST00000394299 ANKRD31Q8N7Z5 1873 aa17.33■□□□□ 0.37
GPC3-202ENST00000394299 CUTAO60888 179 aa17.33■□□□□ 0.36
GPC3-202ENST00000394299 SLURP2P0DP57 97 aa17.33■□□□□ 0.36
GPC3-202ENST00000394299 KRT2P35908 639 aa17.33■□□□□ 0.36
GPC3-202ENST00000394299 AOPEPQ8N6M6 819 aa17.33■□□□□ 0.36
GPC3-202ENST00000394299 GPKOWQ92917 476 aaPredicted RBP eCLIP17.33■□□□□ 0.36
GPC3-202ENST00000394299 KCNH3Q9ULD8 1083 aa17.33■□□□□ 0.36
GPC3-202ENST00000394299 DGKHQ86XP1 1220 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 FOXP4Q8IVH2 680 aaPredicted RBP17.32■□□□□ 0.36
GPC3-202ENST00000394299 AMOTL1Q8IY63 956 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 TMEM47Q9BQJ4 181 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 KCNF1Q9H3M0 494 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 LAMB1P07942 1786 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 ZNF500O60304 480 aaPredicted RBP17.32■□□□□ 0.36
GPC3-202ENST00000394299 XBP1P17861 261 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 PTPREP23469 700 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 ZNF75DP51815 510 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 ZNF174Q15697 407 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 FAM163AQ96GL9 167 aaPredicted RBP17.32■□□□□ 0.36
GPC3-202ENST00000394299 DBNDD1Q9H9R9 158 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 MYH6P13533 1939 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 FAM205AQ6ZU69 1335 aa17.32■□□□□ 0.36
GPC3-202ENST00000394299 BECN2A8MW95 431 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 GOLGA6L19H0YKK7 550 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 SCG2P13521 617 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 RXRBP28702 533 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 PLA2G4DQ86XP0 818 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 PDILTQ8N807 584 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 TBC1D22AQ8WUA7 517 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 COA1Q9GZY4 146 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 MAD2L2Q9UI95 211 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 GAKO14976 1311 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 NLRP5P59047 1200 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 METTL16Q86W50 562 aaKnown RBP17.31■□□□□ 0.36
GPC3-202ENST00000394299 DRC7Q8IY82 874 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 TNFRSF25Q93038 417 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 EYA3Q99504 573 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 DDX4Q9NQI0 724 aaKnown RBP17.31■□□□□ 0.36
GPC3-202ENST00000394299 TTF2Q9UNY4 1162 aaKnown RBP17.31■□□□□ 0.36
GPC3-202ENST00000394299 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
GPC3-202ENST00000394299 ROBO3Q96MS0 1386 aa17.3■□□□□ 0.36
GPC3-202ENST00000394299 CYTH3O43739 400 aa17.3■□□□□ 0.36
GPC3-202ENST00000394299 PTGS1P23219 599 aa17.3■□□□□ 0.36
GPC3-202ENST00000394299 PDE6BP35913 854 aa17.3■□□□□ 0.36
GPC3-202ENST00000394299 TYW1BQ6NUM6 668 aa17.3■□□□□ 0.36
GPC3-202ENST00000394299 MASTLQ96GX5 879 aa17.3■□□□□ 0.36
GPC3-202ENST00000394299 CSRNP2Q9H175 543 aa17.3■□□□□ 0.36
GPC3-202ENST00000394299 DLEC1Q9Y238 1755 aa17.3■□□□□ 0.36
GPC3-202ENST00000394299 FAM237AA0A1B0GTK4 181 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms