RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SYT10Q6XYQ8 523 aa22.38■■□□□ 1.17
RCCD1-201ENST00000394258 ZNF771Q7L3S4 317 aaPredicted RBP22.38■■□□□ 1.17
RCCD1-201ENST00000394258 RREB1Q92766 1687 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 TRIM75PA6NK02 468 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 KIF20AO95235 890 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 KRT2P35908 639 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 RCAN1P53805 252 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 SLC10A5Q5PT55 438 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 KIF18AQ8NI77 898 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 DHX58Q96C10 678 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 HOOK1Q9UJC3 728 aaKnown RBP22.37■■□□□ 1.17
RCCD1-201ENST00000394258 MYH6P13533 1939 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 CASP1P29466 404 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 ZNF174Q15697 407 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 SMARCE1Q969G3 411 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 PHF20Q9BVI0 1012 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 NARFQ9UHQ1 456 aa22.37■■□□□ 1.17
RCCD1-201ENST00000394258 VEGFAP15692 232 aaPredicted RBP22.36■■□□□ 1.17
RCCD1-201ENST00000394258 AFMP43652 599 aa22.36■■□□□ 1.17
RCCD1-201ENST00000394258 LAMB2P55268 1798 aa22.36■■□□□ 1.17
RCCD1-201ENST00000394258 FMR1Q06787 632 aaKnown RBP eCLIP22.36■■□□□ 1.17
RCCD1-201ENST00000394258 LRRN4CLQ8ND94 238 aa22.36■■□□□ 1.17
RCCD1-201ENST00000394258 INTS13Q9NVM9 706 aa22.36■■□□□ 1.17
RCCD1-201ENST00000394258 CEP131Q9UPN4 1083 aa22.36■■□□□ 1.17
RCCD1-201ENST00000394258 MYH13Q9UKX3 1938 aa22.36■■□□□ 1.17
RCCD1-201ENST00000394258 KCND1Q9NSA2 647 aa22.36■■□□□ 1.17
RCCD1-201ENST00000394258 A0A087X0B3 334 aa22.35■■□□□ 1.17
RCCD1-201ENST00000394258 ZBTB22O15209 634 aa22.35■■□□□ 1.17
RCCD1-201ENST00000394258 PRPF3O43395 683 aaKnown RBP22.35■■□□□ 1.17
RCCD1-201ENST00000394258 SRBD1Q8N5C6 995 aaKnown RBP22.35■■□□□ 1.17
RCCD1-201ENST00000394258 CRNKL1Q9BZJ0 848 aaKnown RBP22.35■■□□□ 1.17
RCCD1-201ENST00000394258 CGNQ9P2M7 1197 aaKnown RBP22.35■■□□□ 1.17
RCCD1-201ENST00000394258 SYCP1Q15431 976 aa22.35■■□□□ 1.17
RCCD1-201ENST00000394258 TPTE2Q6XPS3 522 aa22.35■■□□□ 1.17
RCCD1-201ENST00000394258 NYXQ9GZU5 481 aa22.35■■□□□ 1.17
RCCD1-201ENST00000394258 MCM9Q9NXL9 1143 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 NFE2L3Q9Y4A8 694 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 ACTN4O43707 911 aaKnown RBP22.34■■□□□ 1.17
RCCD1-201ENST00000394258 USP17L8P0C7I0 530 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 CDK11BP21127 795 aaKnown RBP22.34■■□□□ 1.17
RCCD1-201ENST00000394258 PPP2R5BQ15173 497 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 ELF2Q15723 593 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 CTCFLQ8NI51 663 aaPredicted RBP22.34■■□□□ 1.17
RCCD1-201ENST00000394258 MTMR7Q9Y216 660 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 CNTNAP4Q9C0A0 1308 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 TSPY2A6NKD2 308 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 RPS6KA4O75676 772 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 TMTC3Q6ZXV5 915 aa22.34■■□□□ 1.17
RCCD1-201ENST00000394258 DUOX1Q9NRD9 1551 aa22.33■■□□□ 1.17
RCCD1-201ENST00000394258 TOP1P11387 765 aaKnown RBP22.33■■□□□ 1.17
RCCD1-201ENST00000394258 VSTM4Q8IW00 320 aa22.33■■□□□ 1.17
RCCD1-201ENST00000394258 ZNF579Q8NAF0 562 aaKnown RBP22.33■■□□□ 1.17
RCCD1-201ENST00000394258 STAMQ92783 540 aa22.33■■□□□ 1.17
RCCD1-201ENST00000394258 RBM28Q9NW13 759 aaKnown RBP22.33■■□□□ 1.17
RCCD1-201ENST00000394258 ADAMTS3O15072 1205 aa22.33■■□□□ 1.16
RCCD1-201ENST00000394258 CBFA2T2O43439 604 aa22.33■■□□□ 1.16
RCCD1-201ENST00000394258 DZIP1Q86YF9 867 aaKnown RBP22.33■■□□□ 1.16
RCCD1-201ENST00000394258 ARHGEF1Q92888 912 aaKnown RBP22.33■■□□□ 1.16
RCCD1-201ENST00000394258 GPR101Q96P66 508 aaPredicted RBP22.33■■□□□ 1.16
RCCD1-201ENST00000394258 MED15Q96RN5 788 aa22.33■■□□□ 1.16
RCCD1-201ENST00000394258 ANKIB1Q9P2G1 1089 aa22.33■■□□□ 1.16
RCCD1-201ENST00000394258 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.16
RCCD1-201ENST00000394258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.33■■□□□ 1.16
RCCD1-201ENST00000394258 COL5A3P25940 1745 aaPredicted RBP22.33■■□□□ 1.16
RCCD1-201ENST00000394258 FGRP09769 529 aa22.32■■□□□ 1.16
RCCD1-201ENST00000394258 BBXQ8WY36 941 aaPredicted RBP22.32■■□□□ 1.16
RCCD1-201ENST00000394258 SYMPKQ92797 1274 aaKnown RBP22.32■■□□□ 1.16
RCCD1-201ENST00000394258 ANKRD2Q9GZV1 360 aa22.32■■□□□ 1.16
RCCD1-201ENST00000394258 PSDA5PKW4 1024 aaPredicted RBP22.32■■□□□ 1.16
RCCD1-201ENST00000394258 SEMA3EO15041 775 aa22.32■■□□□ 1.16
RCCD1-201ENST00000394258 SARSP49591 514 aaKnown RBP22.32■■□□□ 1.16
RCCD1-201ENST00000394258 KLHL10Q6JEL2 608 aa22.32■■□□□ 1.16
RCCD1-201ENST00000394258 SAMSN1Q9NSI8 373 aaKnown RBP22.32■■□□□ 1.16
RCCD1-201ENST00000394258 RTCBQ9Y3I0 505 aaKnown RBP22.32■■□□□ 1.16
RCCD1-201ENST00000394258 VWA3AA6NCI4 1184 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 NRDCO43847 1150 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 CALM1P0DP23 149 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 CALM2P0DP24 149 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 CALM3P0DP25 149 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 MORC3Q14149 939 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 NPY5RQ15761 445 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 KMT5BQ4FZB7 885 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 HOMER1Q86YM7 354 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 NLRP5P59047 1200 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 PIK3AP1Q6ZUJ8 805 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 DYNLL2Q96FJ2 89 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 BRMS1Q9HCU9 246 aa22.31■■□□□ 1.16
RCCD1-201ENST00000394258 CNTNAP5Q8WYK1 1306 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 SLU7O95391 586 aaKnown RBP22.3■■□□□ 1.16
RCCD1-201ENST00000394258 TM4SF1P30408 202 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 FANCGO15287 622 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 DDAH1O94760 285 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 STX17P56962 302 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 PTGDRQ13258 359 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 TTC38Q5R3I4 469 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 SMYD4Q8IYR2 804 aaPredicted RBP22.3■■□□□ 1.16
RCCD1-201ENST00000394258 MLKLQ8NB16 471 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 ATP8A2Q9NTI2 1148 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 A0A1B0GUL6 1792 aa22.3■■□□□ 1.16
RCCD1-201ENST00000394258 ORC4O43929 436 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms