RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SPATA32Q96LK8 384 aa22.84■■□□□ 1.25
RAB5C-202ENST00000393860 VPS33BQ9H267 617 aa22.84■■□□□ 1.25
RAB5C-202ENST00000393860 RBM28Q9NW13 759 aaKnown RBP22.84■■□□□ 1.25
RAB5C-202ENST00000393860 MYO3BQ8WXR4 1341 aa22.84■■□□□ 1.25
RAB5C-202ENST00000393860 DDTLA6NHG4 134 aaPredicted RBP22.83■■□□□ 1.25
RAB5C-202ENST00000393860 AKR1B1P15121 316 aa22.83■■□□□ 1.25
RAB5C-202ENST00000393860 KIF23Q02241 960 aaPredicted RBP22.83■■□□□ 1.25
RAB5C-202ENST00000393860 FUT2Q10981 343 aa22.83■■□□□ 1.25
RAB5C-202ENST00000393860 TMTC3Q6ZXV5 915 aa22.83■■□□□ 1.25
RAB5C-202ENST00000393860 RASGRP2Q7LDG7 609 aa22.83■■□□□ 1.25
RAB5C-202ENST00000393860 ZSCAN29Q8IWY8 852 aaPredicted RBP22.83■■□□□ 1.25
RAB5C-202ENST00000393860 LEO1Q8WVC0 666 aaPredicted RBP22.83■■□□□ 1.25
RAB5C-202ENST00000393860 GMLQ99445 158 aa22.83■■□□□ 1.25
RAB5C-202ENST00000393860 TMEM47Q9BQJ4 181 aa22.83■■□□□ 1.25
RAB5C-202ENST00000393860 TMEM63CQ9P1W3 806 aa22.83■■□□□ 1.25
RAB5C-202ENST00000393860 NT5C2P49902 561 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 CXCL9Q07325 125 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 TRIM29Q14134 588 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 SH3BP5LQ7L8J4 393 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 CLEC10AQ8IUN9 316 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 ANKS1AQ92625 1134 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 CEP95Q96GE4 821 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 IDI2Q9BXS1 227 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 CLRN2A0PK11 232 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 DEXIO95424 95 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 UBE2HP62256 183 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 PPP2R5BQ15173 497 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 CCDC178Q5BJE1 867 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 SRBD1Q8N5C6 995 aaKnown RBP22.82■■□□□ 1.24
RAB5C-202ENST00000393860 PIBF1Q8WXW3 757 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 KCNJ14Q9UNX9 436 aa22.82■■□□□ 1.24
RAB5C-202ENST00000393860 SHMT1P34896 483 aa22.81■■□□□ 1.24
RAB5C-202ENST00000393860 WASF1Q92558 559 aa22.81■■□□□ 1.24
RAB5C-202ENST00000393860 USP28Q96RU2 1077 aa22.81■■□□□ 1.24
RAB5C-202ENST00000393860 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.81■■□□□ 1.24
RAB5C-202ENST00000393860 CNTNAP5Q8WYK1 1306 aa22.81■■□□□ 1.24
RAB5C-202ENST00000393860 EIF6P56537 245 aaKnown RBP22.8■■□□□ 1.24
RAB5C-202ENST00000393860 AKAP17AQ02040 695 aaKnown RBP22.8■■□□□ 1.24
RAB5C-202ENST00000393860 STAG2Q8N3U4 1231 aa22.8■■□□□ 1.24
RAB5C-202ENST00000393860 JDP2Q8WYK2 163 aa22.8■■□□□ 1.24
RAB5C-202ENST00000393860 RNF26Q9BY78 433 aaPredicted RBP22.8■■□□□ 1.24
RAB5C-202ENST00000393860 SCAND2PQ9GZW5 306 aaPredicted RBP22.8■■□□□ 1.24
RAB5C-202ENST00000393860 DNAJC18Q9H819 358 aa22.8■■□□□ 1.24
RAB5C-202ENST00000393860 HDAC9Q9UKV0 1011 aa22.8■■□□□ 1.24
RAB5C-202ENST00000393860 V9GY48 417 aaPredicted RBP22.8■■□□□ 1.24
RAB5C-202ENST00000393860 ZSCAN23Q3MJ62 389 aa22.8■■□□□ 1.24
RAB5C-202ENST00000393860 SWAP70Q9UH65 585 aa22.8■■□□□ 1.24
RAB5C-202ENST00000393860 SHTN1A0MZ66 631 aa22.79■■□□□ 1.24
RAB5C-202ENST00000393860 SPDYE2BA6NHP3 402 aa22.79■■□□□ 1.24
RAB5C-202ENST00000393860 TCP10L2B9ZVM9 353 aa22.79■■□□□ 1.24
RAB5C-202ENST00000393860 SPDYE6P0CI01 402 aa22.79■■□□□ 1.24
RAB5C-202ENST00000393860 GNL2Q13823 731 aaKnown RBP22.79■■□□□ 1.24
RAB5C-202ENST00000393860 DLGAP5Q15398 846 aa22.79■■□□□ 1.24
RAB5C-202ENST00000393860 PKN1Q16512 942 aa22.79■■□□□ 1.24
RAB5C-202ENST00000393860 OGFOD1Q8N543 542 aa22.79■■□□□ 1.24
RAB5C-202ENST00000393860 MPHOSPH10O00566 681 aaKnown RBP22.78■■□□□ 1.24
RAB5C-202ENST00000393860 PRELPP51888 382 aa22.78■■□□□ 1.24
RAB5C-202ENST00000393860 GRM4Q14833 912 aa22.78■■□□□ 1.24
RAB5C-202ENST00000393860 CIAPIN1Q6FI81 312 aa22.78■■□□□ 1.24
RAB5C-202ENST00000393860 SHISA4Q96DD7 197 aa22.78■■□□□ 1.24
RAB5C-202ENST00000393860 ZNF396Q96N95 335 aaPredicted RBP22.78■■□□□ 1.24
RAB5C-202ENST00000393860 CFAP45Q9UL16 551 aa22.78■■□□□ 1.24
RAB5C-202ENST00000393860 ELP1O95163 1332 aa22.78■■□□□ 1.24
RAB5C-202ENST00000393860 PRPF3O43395 683 aaKnown RBP22.78■■□□□ 1.24
RAB5C-202ENST00000393860 SHROOM1Q2M3G4 852 aaPredicted RBP22.78■■□□□ 1.24
RAB5C-202ENST00000393860 VPS54Q9P1Q0 977 aa22.78■■□□□ 1.24
RAB5C-202ENST00000393860 GOLGA8HP0CJ92 632 aa22.77■■□□□ 1.24
RAB5C-202ENST00000393860 KIF5BP33176 963 aa22.77■■□□□ 1.24
RAB5C-202ENST00000393860 MYSM1Q5VVJ2 828 aa22.77■■□□□ 1.24
RAB5C-202ENST00000393860 BRAPQ7Z569 592 aa22.77■■□□□ 1.24
RAB5C-202ENST00000393860 EHD4Q9H223 541 aa22.77■■□□□ 1.24
RAB5C-202ENST00000393860 DHX36Q9H2U1 1008 aaKnown RBP22.77■■□□□ 1.24
RAB5C-202ENST00000393860 MAD2L2Q9UI95 211 aa22.77■■□□□ 1.24
RAB5C-202ENST00000393860 BAZ2BQ9UIF8 2168 aaKnown RBP22.77■■□□□ 1.24
RAB5C-202ENST00000393860 PLIN4Q96Q06 1357 aa22.77■■□□□ 1.24
RAB5C-202ENST00000393860 LRRC47Q8N1G4 583 aaKnown RBP22.76■■□□□ 1.23
RAB5C-202ENST00000393860 PGBD1Q96JS3 809 aa22.76■■□□□ 1.23
RAB5C-202ENST00000393860 ZNF70Q9UC06 446 aaPredicted RBP22.76■■□□□ 1.23
RAB5C-202ENST00000393860 MMP1P03956 469 aa22.76■■□□□ 1.23
RAB5C-202ENST00000393860 AGBL3Q8NEM8 1001 aa22.76■■□□□ 1.23
RAB5C-202ENST00000393860 TRIM34Q9BYJ4 488 aa22.76■■□□□ 1.23
RAB5C-202ENST00000393860 MTMR4Q9NYA4 1195 aa22.76■■□□□ 1.23
RAB5C-202ENST00000393860 TMOD2Q9NZR1 351 aa22.76■■□□□ 1.23
RAB5C-202ENST00000393860 PI4KBQ9UBF8 816 aa22.76■■□□□ 1.23
RAB5C-202ENST00000393860 CLIC4Q9Y696 253 aa22.76■■□□□ 1.23
RAB5C-202ENST00000393860 TOP1P11387 765 aaKnown RBP22.75■■□□□ 1.23
RAB5C-202ENST00000393860 GAS2L3Q86XJ1 694 aa22.75■■□□□ 1.23
RAB5C-202ENST00000393860 CPVLQ9H3G5 476 aa22.75■■□□□ 1.23
RAB5C-202ENST00000393860 VEZTQ9HBM0 779 aa22.75■■□□□ 1.23
RAB5C-202ENST00000393860 ARFGEF1Q9Y6D6 1849 aa22.75■■□□□ 1.23
RAB5C-202ENST00000393860 IGKV6D-41A0A0C4DH26 115 aa22.74■■□□□ 1.23
RAB5C-202ENST00000393860 BTBD18B2RXH4 712 aa22.74■■□□□ 1.23
RAB5C-202ENST00000393860 ENTPD3O75355 529 aa22.74■■□□□ 1.23
RAB5C-202ENST00000393860 DIS3L2Q8IYB7 885 aaKnown RBP22.74■■□□□ 1.23
RAB5C-202ENST00000393860 GOLGA6L4A6NEF3 574 aa22.74■■□□□ 1.23
RAB5C-202ENST00000393860 NPM3O75607 178 aaKnown RBP22.74■■□□□ 1.23
RAB5C-202ENST00000393860 VEGFAP15692 232 aaPredicted RBP22.74■■□□□ 1.23
RAB5C-202ENST00000393860 SLC35G1Q2M3R5 365 aa22.74■■□□□ 1.23
RAB5C-202ENST00000393860 OXER1Q8TDS5 423 aa22.74■■□□□ 1.23
RAB5C-202ENST00000393860 SPON1Q9HCB6 807 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms