RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 SPON1Q9HCB6 807 aa6.89□□□□□ -1.31
NPM1-203ENST00000393820 MARK1Q9P0L2 795 aa6.89□□□□□ -1.31
NPM1-203ENST00000393820 TMEM63CQ9P1W3 806 aa6.89□□□□□ -1.31
NPM1-203ENST00000393820 KCNH4Q9UQ05 1017 aa6.89□□□□□ -1.31
NPM1-203ENST00000393820 FNDC3AQ9Y2H6 1198 aaKnown RBP6.89□□□□□ -1.31
NPM1-203ENST00000393820 OVOS2A0A0G2JMS6 1433 aa6.89□□□□□ -1.31
NPM1-203ENST00000393820 OVOS2A0A0J9YW53 1432 aa6.89□□□□□ -1.31
NPM1-203ENST00000393820 OVOS2Q6IE36 1432 aa6.89□□□□□ -1.31
NPM1-203ENST00000393820 NRKQ7Z2Y5 1582 aa6.89□□□□□ -1.31
NPM1-203ENST00000393820 EVC2Q86UK5 1308 aa6.89□□□□□ -1.31
NPM1-203ENST00000393820 COL5A2P05997 1499 aaPredicted RBP6.89□□□□□ -1.31
NPM1-203ENST00000393820 PTMSP20962 102 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 MCM4P33991 863 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 USP6P35125 1406 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 HDAC1Q13547 482 aaPredicted RBP6.88□□□□□ -1.31
NPM1-203ENST00000393820 NUTM2GQ5VZR2 741 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 CD163Q86VB7 1156 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 KRTAP9-9Q9BYP9 154 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 BCO2Q9BYV7 579 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 CHRDQ9H2X0 955 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 TTC21AQ8NDW8 1320 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 MYOM1P52179 1685 aa6.88□□□□□ -1.31
NPM1-203ENST00000393820 PARP4Q9UKK3 1724 aaKnown RBP6.87□□□□□ -1.31
NPM1-203ENST00000393820 RGPD3A6NKT7 1758 aaPredicted RBP6.87□□□□□ -1.31
NPM1-203ENST00000393820 RGPD4Q7Z3J3 1758 aa6.87□□□□□ -1.31
NPM1-203ENST00000393820 MRE11P49959 708 aa6.87□□□□□ -1.31
NPM1-203ENST00000393820 MVPQ14764 893 aaKnown RBP6.87□□□□□ -1.31
NPM1-203ENST00000393820 DDB1Q16531 1140 aa6.87□□□□□ -1.31
NPM1-203ENST00000393820 ZKSCAN2Q63HK3 967 aa6.87□□□□□ -1.31
NPM1-203ENST00000393820 ZNF746Q6NUN9 644 aaPredicted RBP6.87□□□□□ -1.31
NPM1-203ENST00000393820 SLKQ9H2G2 1235 aaPredicted RBP6.87□□□□□ -1.31
NPM1-203ENST00000393820 KBTBD4Q9NVX7 518 aa6.87□□□□□ -1.31
NPM1-203ENST00000393820 GDF2Q9UK05 429 aaPredicted RBP6.87□□□□□ -1.31
NPM1-203ENST00000393820 PHF24Q9UPV7 400 aa6.87□□□□□ -1.31
NPM1-203ENST00000393820 VIRMAQ69YN4 1812 aaKnown RBP6.87□□□□□ -1.31
NPM1-203ENST00000393820 WDR17Q8IZU2 1322 aa6.87□□□□□ -1.31
NPM1-203ENST00000393820 SLIT3O75094 1523 aa6.87□□□□□ -1.31
NPM1-203ENST00000393820 NSD2O96028 1365 aa6.87□□□□□ -1.31
NPM1-203ENST00000393820 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 KCNQ2O43526 872 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 EIF5BO60841 1220 aaKnown RBP6.86□□□□□ -1.31
NPM1-203ENST00000393820 SASH3O75995 380 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 POLR3DP05423 398 aaPredicted RBP6.86□□□□□ -1.31
NPM1-203ENST00000393820 BMP4P12644 408 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 XRCC6P12956 609 aaKnown RBP eCLIP6.86□□□□□ -1.317e-8■□□□□ 10.6
NPM1-203ENST00000393820 TARSP26639 723 aaKnown RBP6.86□□□□□ -1.31
NPM1-203ENST00000393820 SPEM2Q0P670 501 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 EGFLAMQ63HQ2 1017 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 TOM1L2Q6ZVM7 507 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 JAZF1Q86VZ6 243 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 GALNT12Q8IXK2 581 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 DZIP1LQ8IYY4 767 aaKnown RBP6.86□□□□□ -1.31
NPM1-203ENST00000393820 EDARADDQ8WWZ3 215 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 SNX21Q969T3 373 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 NOC4LQ9BVI4 516 aaKnown RBP6.86□□□□□ -1.31
NPM1-203ENST00000393820 C22orf23Q9BZE7 217 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 RREB1Q92766 1687 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 ABCC6O95255 1503 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 XYLBO75191 536 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 RLBP1P12271 317 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 KCNQ4P56696 695 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 PCBP4P57723 403 aaKnown RBP6.86□□□□□ -1.31
NPM1-203ENST00000393820 GRM2Q14416 872 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 BMS1Q14692 1282 aaKnown RBP6.86□□□□□ -1.31
NPM1-203ENST00000393820 SKOR2Q2VWA4 1001 aaPredicted RBP6.86□□□□□ -1.31
NPM1-203ENST00000393820 LINC00114Q6XXX2 140 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 ARHGEF25Q86VW2 580 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 BHMTQ93088 406 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 CARD10Q9BWT7 1032 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 GSX2Q9BZM3 304 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 SUV39H2Q9H5I1 410 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 DDX19BQ9UMR2 479 aa6.86□□□□□ -1.31
NPM1-203ENST00000393820 IL16Q14005 1332 aa6.85□□□□□ -1.31
NPM1-203ENST00000393820 EREGO14944 169 aa6.85□□□□□ -1.31
NPM1-203ENST00000393820 HMGB2P26583 209 aaKnown RBP6.85□□□□□ -1.31
NPM1-203ENST00000393820 SERINC3Q13530 473 aa6.85□□□□□ -1.31
NPM1-203ENST00000393820 SMC5Q8IY18 1101 aa6.85□□□□□ -1.31
NPM1-203ENST00000393820 C3orf58Q8NDZ4 430 aa6.85□□□□□ -1.31
NPM1-203ENST00000393820 CHMP4BQ9H444 224 aaKnown RBP6.85□□□□□ -1.31
NPM1-203ENST00000393820 ZFATQ9P243 1243 aa6.85□□□□□ -1.31
NPM1-203ENST00000393820 KLF15Q9UIH9 416 aa6.85□□□□□ -1.31
NPM1-203ENST00000393820 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.85□□□□□ -1.31
NPM1-203ENST00000393820 EXOC5O00471 708 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 GNB5O14775 395 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 IPO8O15397 1037 aaKnown RBP6.84□□□□□ -1.31
NPM1-203ENST00000393820 GADD45BO75293 160 aaPredicted RBP6.84□□□□□ -1.31
NPM1-203ENST00000393820 EPB42P16452 691 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 GSTT1P30711 240 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 MTHFSP49914 203 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 LAMC2Q13753 1193 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 DOC2BQ14184 412 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 NBPF6Q5VWK0 638 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 FTSJ3Q8IY81 847 aaKnown RBP6.84□□□□□ -1.31
NPM1-203ENST00000393820 C1orf127Q8N9H9 656 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 GLIS3Q8NEA6 775 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 SEC16BQ96JE7 1060 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 NBPF4Q96M43 638 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 PNNQ9H307 717 aaKnown RBP6.84□□□□□ -1.31
NPM1-203ENST00000393820 IGFLR1Q9H665 355 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms