RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 ATP8A2Q9NTI2 1148 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 GSTTP1A0A1W2PQM5 241 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 PRKAB2O43741 272 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 PRKG1Q13976 671 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 GPKOWQ92917 476 aaPredicted RBP eCLIP18.62■□□□□ 0.57
SCN3B-202ENST00000392770 ERICH4A6NGS2 130 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 NR1I2O75469 434 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 PCP11498 1178 aaKnown RBP18.62■□□□□ 0.57
SCN3B-202ENST00000392770 GUCA1BQ9UMX6 200 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 PTPRUQ92729 1446 aa18.62■□□□□ 0.57
SCN3B-202ENST00000392770 KRT86O43790 486 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 ZBED4O75132 1171 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 KIF5AQ12840 1032 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 HOOK2Q96ED9 719 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 FAM212AQ96EL1 285 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 STK24Q9Y6E0 443 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 IGSF22Q8N9C0 903 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 CNKSR1Q969H4 720 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 TUBB4AP04350 444 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 EPB41P11171 864 aaKnown RBP18.61■□□□□ 0.57
SCN3B-202ENST00000392770 GPT2Q8TD30 523 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 TAOK3Q9H2K8 898 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 CFBP00751 764 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 SCG2P13521 617 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 CHAMP1Q96JM3 812 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 HOMER2Q9NSB8 354 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 BCCIPQ9P287 314 aaKnown RBP eCLIP18.61■□□□□ 0.57
SCN3B-202ENST00000392770 FRMD4BQ9Y2L6 1034 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 DYMQ7RTS9 669 aa18.61■□□□□ 0.57
SCN3B-202ENST00000392770 RNF216Q9NWF9 866 aaPredicted RBP18.61■□□□□ 0.57
SCN3B-202ENST00000392770 RXRBP28702 533 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 CPXCR1Q8N123 301 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 POLR3GO15318 223 aaPredicted RBP18.6■□□□□ 0.57
SCN3B-202ENST00000392770 CSGALNACT2Q8N6G5 542 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 CLIC4Q9Y696 253 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 SYNCQ9H7C4 482 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 RIMS1Q86UR5 1692 aaKnown RBP18.6■□□□□ 0.57
SCN3B-202ENST00000392770 CARMIL3Q8ND23 1372 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 CERKLQ49MI3 558 aaPredicted RBP18.6■□□□□ 0.57
SCN3B-202ENST00000392770 ZNF569Q5MCW4 686 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 SYT10Q6XYQ8 523 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.6■□□□□ 0.57
SCN3B-202ENST00000392770 STAMQ92783 540 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 IMPG2Q9BZV3 1241 aa18.6■□□□□ 0.57
SCN3B-202ENST00000392770 BSDC1Q9NW68 430 aaPredicted RBP18.6■□□□□ 0.57
SCN3B-202ENST00000392770 PPLO60437 1756 aa18.59■□□□□ 0.57
SCN3B-202ENST00000392770 KLRF2D3W0D1 207 aa18.59■□□□□ 0.57
SCN3B-202ENST00000392770 CALUO43852 315 aaPredicted RBP18.59■□□□□ 0.57
SCN3B-202ENST00000392770 RAPGEF1Q13905 1077 aa18.59■□□□□ 0.57
SCN3B-202ENST00000392770 BCS1LQ9Y276 419 aa18.59■□□□□ 0.57
SCN3B-202ENST00000392770 IQSEC2Q5JU85 1478 aa18.59■□□□□ 0.57
SCN3B-202ENST00000392770 RASGRF1Q13972 1273 aa18.59■□□□□ 0.57
SCN3B-202ENST00000392770 NELFBQ8WX92 580 aa18.59■□□□□ 0.57
SCN3B-202ENST00000392770 CYP19A1P11511 503 aaPredicted RBP18.59■□□□□ 0.57
SCN3B-202ENST00000392770 MTX1Q13505 466 aa18.59■□□□□ 0.57
SCN3B-202ENST00000392770 COL15A1P39059 1388 aa18.59■□□□□ 0.57
SCN3B-202ENST00000392770 TMEM110-MUSTN1A8MSY1 372 aa18.58■□□□□ 0.57
SCN3B-202ENST00000392770 FMNL1O95466 1100 aaPredicted RBP18.58■□□□□ 0.57
SCN3B-202ENST00000392770 ADGRB1O14514 1584 aa18.58■□□□□ 0.57
SCN3B-202ENST00000392770 OVOS2A0A0G2JMS6 1433 aa18.58■□□□□ 0.57
SCN3B-202ENST00000392770 BBOX1O75936 387 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 CEP112Q8N8E3 955 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 NSUN7Q8NE18 718 aaKnown RBP18.58■□□□□ 0.56
SCN3B-202ENST00000392770 SELENOOQ9BVL4 669 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 MCAMP43121 646 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 TBC1D8BQ0IIM8 1120 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 TBC1D7Q9P0N9 293 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 GRAPQ13588 217 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 TRIM14Q14142 442 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 TMC4Q7Z404 712 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 RGS22Q8NE09 1264 aa18.58■□□□□ 0.56
SCN3B-202ENST00000392770 GRAPLQ8TC17 118 aaPredicted RBP18.58■□□□□ 0.56
SCN3B-202ENST00000392770 BTBD18B2RXH4 712 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 CTR9Q6PD62 1173 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 CLEC4GQ6UXB4 293 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 DYDC1Q8WWB3 177 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 PCDHA7Q9UN72 937 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 DNM3Q9UQ16 869 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 ARHGEF35A5YM69 484 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 INF2Q27J81 1249 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 APOA5Q6Q788 366 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 DEPDC5O75140 1603 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 CAPZA3Q96KX2 299 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 GOLGA6L10A0A0M3HER8 536 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 CCDC169A6NNP5 214 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 SLU7O95391 586 aaKnown RBP18.57■□□□□ 0.56
SCN3B-202ENST00000392770 SYNE4Q8N205 404 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 LMBR1Q8WVP7 490 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 RPS6KA4O75676 772 aa18.57■□□□□ 0.56
SCN3B-202ENST00000392770 TRMT44Q8IYL2 757 aaKnown RBP18.57■□□□□ 0.56
SCN3B-202ENST00000392770 PSTPIP2Q9H939 334 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 ZNF408Q9H9D4 720 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 CEP170BQ9Y4F5 1589 aaPredicted RBP18.56■□□□□ 0.56
SCN3B-202ENST00000392770 NECTIN1Q15223 517 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 CLIC6Q96NY7 704 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 SRRTQ9BXP5 876 aaKnown RBP18.56■□□□□ 0.56
SCN3B-202ENST00000392770 NFE2L3Q9Y4A8 694 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 GCOM1H8Y6P7 765 aaPredicted RBP18.56■□□□□ 0.56
SCN3B-202ENST00000392770 SH2B2O14492 632 aaPredicted RBP18.56■□□□□ 0.56
SCN3B-202ENST00000392770 LARGE1O95461 756 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms