RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 MIER3Q7Z3K6 550 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 P3H4Q92791 437 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 RAB17Q9H0T7 212 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 MBD4O95243 580 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 S100BP04271 92 aaPredicted RBP13.13□□□□□ -0.31
CIT-203ENST00000392521 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
CIT-203ENST00000392521 SLC1A4P43007 532 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 ARHGAP44Q17R89 818 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
CIT-203ENST00000392521 GBP5Q96PP8 586 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 GOLGA8CPA6NN73 597 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 A6NNZ2 444 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 PPP1R12AO14974 1030 aaPredicted RBP13.13□□□□□ -0.31
CIT-203ENST00000392521 TUBB8Q3ZCM7 444 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 GLG1Q92896 1179 aa13.13□□□□□ -0.31
CIT-203ENST00000392521 CD109Q6YHK3 1445 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 TYW5A2RUC4 315 aaKnown RBP13.12□□□□□ -0.31
CIT-203ENST00000392521 B4E1Z4 1266 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 HERC4Q5GLZ8 1057 aaPredicted RBP13.12□□□□□ -0.31
CIT-203ENST00000392521 CSPG5O95196 566 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 CEBPAP49715 358 aaPredicted RBP13.12□□□□□ -0.31
CIT-203ENST00000392521 CFAP221Q4G0U5 840 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 CCDC93Q567U6 631 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 ORC6Q9Y5N6 252 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 MAIP1Q8WWC4 291 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 STAM2O75886 525 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 IL2RBP14784 551 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 XPAP23025 273 aaPredicted RBP13.12□□□□□ -0.31
CIT-203ENST00000392521 PRPSAP1Q14558 356 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
CIT-203ENST00000392521 RAPH1Q70E73 1250 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
CIT-203ENST00000392521 DEXIO95424 95 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 CFBP00751 764 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 LMNB1P20700 586 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 TPH2Q8IWU9 490 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 CCDC13Q8IYE1 715 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
CIT-203ENST00000392521 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
CIT-203ENST00000392521 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 NLRX1Q86UT6 975 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 TRIM68Q6AZZ1 485 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 ZNF449Q6P9G9 518 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 DYMQ7RTS9 669 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 TTF2Q9UNY4 1162 aaKnown RBP13.11□□□□□ -0.31
CIT-203ENST00000392521 LARGE2Q8N3Y3 721 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.11□□□□□ -0.31
CIT-203ENST00000392521 LRGUKQ96M69 825 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 CSADQ9Y600 493 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 CDK13Q14004 1512 aaKnown RBP13.11□□□□□ -0.31
CIT-203ENST00000392521 MAST3O60307 1309 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 ATL3Q6DD88 541 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
CIT-203ENST00000392521 NSD2O96028 1365 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 FAM71BQ8TC56 605 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 LRMPQ12912 555 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 TUBB2AQ13885 445 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 RPS6KA1Q15418 735 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 SNX29Q8TEQ0 813 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 TUBB2BQ9BVA1 445 aa13.11□□□□□ -0.31
CIT-203ENST00000392521 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 PDCD2Q16342 344 aaPredicted RBP13.1□□□□□ -0.31
CIT-203ENST00000392521 POLKQ9UBT6 870 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 NME8Q8N427 588 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 DEPTORQ8TB45 409 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 Q9H521 79 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 H7C1D1 291 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 IFNB1P01574 187 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 FBXW4P57775 412 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 KRT33BQ14525 404 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 RNF217Q8TC41 542 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 ATF7P17544 494 aaPredicted RBP13.1□□□□□ -0.31
CIT-203ENST00000392521 SERPINB6P35237 376 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 GNL1P36915 607 aaPredicted RBP13.1□□□□□ -0.31
CIT-203ENST00000392521 KAZNQ674X7 775 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 UBN1Q9NPG3 1134 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 HNRNPCL2B2RXH8 293 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 SORBS3O60504 671 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 HNRNPCL1O60812 293 aaKnown RBP13.1□□□□□ -0.31
CIT-203ENST00000392521 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
CIT-203ENST00000392521 KLHL30Q0D2K2 578 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 SESTD1Q86VW0 696 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 CABS1Q96KC9 395 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 SMYD2Q9NRG4 433 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 ANKRD42Q8N9B4 389 aa13.1□□□□□ -0.31
CIT-203ENST00000392521 RGS16O15492 202 aaPredicted RBP13.09□□□□□ -0.31
CIT-203ENST00000392521 STX2P32856 288 aa13.09□□□□□ -0.31
CIT-203ENST00000392521 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
CIT-203ENST00000392521 STK32BQ9NY57 414 aa13.09□□□□□ -0.31
CIT-203ENST00000392521 SFMBT1Q9UHJ3 866 aa13.09□□□□□ -0.31
CIT-203ENST00000392521 ANGPTL3Q9Y5C1 460 aa13.09□□□□□ -0.31
CIT-203ENST00000392521 ADGRL1O94910 1474 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms