RNA–Protein interactions for RNA: ENST00000391975.5

HDLBP-203, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 6,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-203ENST00000391975 NEURL1BA8MQ27 555 aa12.9□□□□□ -0.34
HDLBP-203ENST00000391975 POLA2Q14181 598 aa12.9□□□□□ -0.34
HDLBP-203ENST00000391975 INTS8Q75QN2 995 aaKnown RBP12.9□□□□□ -0.34
HDLBP-203ENST00000391975 SYNCQ9H7C4 482 aa12.9□□□□□ -0.34
HDLBP-203ENST00000391975 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
HDLBP-203ENST00000391975 BICDL2A1A5D9 508 aa12.9□□□□□ -0.34
HDLBP-203ENST00000391975 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-203ENST00000391975 GNGT1P63211 74 aa12.9□□□□□ -0.34
HDLBP-203ENST00000391975 SYCP3Q8IZU3 236 aa12.9□□□□□ -0.34
HDLBP-203ENST00000391975 NOC4LQ9BVI4 516 aaKnown RBP12.9□□□□□ -0.34
HDLBP-203ENST00000391975 EPC1Q9H2F5 836 aa12.9□□□□□ -0.34
HDLBP-203ENST00000391975 KCNK9Q9NPC2 374 aa12.9□□□□□ -0.34
HDLBP-203ENST00000391975 ADAM21Q9UKJ8 722 aa12.9□□□□□ -0.34
HDLBP-203ENST00000391975 V9GY48 417 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-203ENST00000391975 MAP2K2P36507 400 aa12.9□□□□□ -0.35
HDLBP-203ENST00000391975 SLC35F6Q8N357 371 aa12.9□□□□□ -0.35
HDLBP-203ENST00000391975 JDP2Q8WYK2 163 aa12.9□□□□□ -0.35
HDLBP-203ENST00000391975 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.35
HDLBP-203ENST00000391975 CCDC51Q96ER9 411 aa12.9□□□□□ -0.35
HDLBP-203ENST00000391975 BLZF1Q9H2G9 400 aa12.9□□□□□ -0.35
HDLBP-203ENST00000391975 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.9□□□□□ -0.351e-6■■□□□ 12.3
HDLBP-203ENST00000391975 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 SMIM23A6NLE4 172 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 BTBD18B2RXH4 712 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 ANKRD65E5RJM6 399 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 SNX16P57768 344 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
HDLBP-203ENST00000391975 CTIFO43310 598 aaKnown RBP12.89□□□□□ -0.35
HDLBP-203ENST00000391975 TNNC1P63316 161 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 NEDD9Q14511 834 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 CSGALNACT2Q8N6G5 542 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 GCP02774 474 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 PRPHP41219 470 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 ZAP70P43403 619 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 MAP7Q14244 749 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 PROSER3Q2NL68 480 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 DTHD1Q6ZMT9 781 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 HEATR3Q7Z4Q2 680 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 CAPN7Q9Y6W3 813 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 PRR16Q569H4 304 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 VSTM4Q8IW00 320 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 FAM89AQ96GI7 184 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 HAUS7Q99871 368 aa12.89□□□□□ -0.35
HDLBP-203ENST00000391975 TOB2Q14106 344 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-203ENST00000391975 NOSTRINQ8IVI9 506 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 NUF2Q9BZD4 464 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-203ENST00000391975 PLEKHA4Q9H4M7 779 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 hCG_1642624A0A1W2PR95 340 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 CASP14P31944 242 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 CCT5P48643 541 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-203ENST00000391975 IFT74Q96LB3 600 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 CALML3P27482 149 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 PPP1R12CQ9BZL4 782 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 PRDM4Q9UKN5 801 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 RPAP1Q9BWH6 1393 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-203ENST00000391975 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 CCDC170Q8IYT3 715 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-203ENST00000391975 NLRP1Q9C000 1473 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 RTL9Q8NET4 1388 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 RAD51AP2Q09MP3 1159 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-203ENST00000391975 PLBD2Q8NHP8 589 aa12.88□□□□□ -0.35
HDLBP-203ENST00000391975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.88□□□□□ -0.353e-6■■■■■ 29.2
HDLBP-203ENST00000391975 A6NNZ2 444 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 FGAP02671 866 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 MAGEA1P43355 309 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 TUBB8Q3ZCM7 444 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 PIK3AP1Q6ZUJ8 805 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
HDLBP-203ENST00000391975 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 NELFBQ8WX92 580 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 KDRP35968 1356 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 CABS1Q96KC9 395 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 PFDN4Q9NQP4 134 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 JRKLQ9Y4A0 524 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 TMEM110-MUSTN1A8MSY1 372 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 PRDM1O75626 825 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 VPS52Q8N1B4 723 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.87□□□□□ -0.357e-10■□□□□ 8.3
HDLBP-203ENST00000391975 UBLCP1Q8WVY7 318 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-203ENST00000391975 MYCBPQ99417 103 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-203ENST00000391975 OSBPL5Q9H0X9 879 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-203ENST00000391975 GOLPH3LQ9H4A5 285 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 ARMT1Q9H993 441 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 ENC1O14682 589 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 SASH1O94885 1247 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 HAUS4Q9H6D7 363 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 WDR70Q9NW82 654 aa12.87□□□□□ -0.35
HDLBP-203ENST00000391975 CALM1P0DP23 149 aa12.86□□□□□ -0.35
HDLBP-203ENST00000391975 CALM2P0DP24 149 aa12.86□□□□□ -0.35
HDLBP-203ENST00000391975 CALM3P0DP25 149 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms